Solea solea (common sole): 131456648
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Entry
131456648 CDS
T10853
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
131456648 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131456648 (irf5)
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
131456648 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
131456648
NCBI-ProteinID:
XP_058481132
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All DBs
Position
3:2630527..2634708
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AA seq
459 aa
AA seq
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MSVQPRRIRLKPWLVAQVDSRRYPGLQWLSPDHRLFQIPWRHATRHTPVSEEENTIFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVQPYKIYEVCEQPGSA
DVVDDDDDEMPKLTDLSINPRIIDSAPFSSFPTHSEENPFGRHMTPVPLLPVTSDLQAQS
FNGPVNTLQDLDSLPPSAGPDLMETNSVGEIQNQAEPQKYDLLSSVPLTDLDLKFQYRGR
MMGSLTVSNPQGCRLYYGHLEPTPEQVDLFGPVTLQQVLFPGTSEIQNQKQRFYTEALLD
VMDRGLILEMWEQDIYAVRLCQCKVFWSGPGMSEQGPPNPMERERKIKVFSLNEFLQGLI
LFQKGEAPNPPPFEIYFCFGEDWPDRKPKEKKLIIVQVVPVVARILTEMFSGELSWSTDS
IRLQISNPDVKDQTVAQFKELQKLLQSQHIQGPWTPNVS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcagcctcgccggatccgcctgaagccgtggctggtggcgcaggtggacagc
cgcaggtacccgggtctgcagtggctcagtccagaccaccgactcttccagatcccctgg
agacacgcgacgcgccacacgccagtgtcagaggaggagaacaccatcttcaaggcgtgg
gcgttggagacgggtaaatatcaggagggcgtggacgaacccgaccccgcgaagtggaaa
gcgaaccttcgctgcgctttgaacaagagccgcgagtttcagctgaaatacgacggaacc
aaagagacgccggtgcaaccgtacaagatctacgaggtctgtgagcagccgggcagcgca
gatgtcgtggatgacgacgatgacgagatgccaaagctgacggacctcagcatcaacccc
aggatcatagactccgcccccttcagctcatttcccactcattcggaggagaatccgttt
ggtcgccatatgacgccggtaccactcctccctgtgacctccgacctccaggctcagagt
tttaatggaccagttaacacacttcaggacctggactccttgccaccctctgctggacca
gacctgatggaaaccaacagtgtgggtgagatccagaaccaggcagagcctcagaagtat
gaccttctgagcagcgtcccactaacagatctagacctgaagttccagtaccggggccgg
atgatggggtctctcactgtcagcaaccctcaaggctgccggctgtactacggccacctg
gagccgacgccggagcaagtggacctgtttggaccggtcaccctgcagcaggtcctgttc
ccaggtacgtctgaaatccagaaccagaagcagcggttctacactgaggctctgctggac
gtgatggaccgaggtctgatcctggagatgtgggaacaggacatctatgccgtacgcctg
tgtcagtgtaaggtgttctggtctggaccgggtatgtctgaacagggtccaccgaacccc
atggagcgcgagaggaagatcaaagtgttcagcctcaatgagttcctgcaaggtttgatc
ctgttccagaaaggtgaagctccaaacccaccaccgtttgagatctacttctgctttggg
gaggactggccggaccgcaaaccaaaggagaagaaactgatcatcgtccaggtggttcct
gtcgtggctcgaattctgacggagatgttctctggagagctcagctggtccacggacagc
atccgactacagatctccaacccggacgtgaaggaccagacggtggcacagtttaaagag
ctgcagaagctcctgcagagccaacacatccagggtccctggacccccaacgtgtcctga
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