Solea solea (common sole): 131458146
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Entry
131458146 CDS
T10853
Name
(RefSeq) rap guanine nucleotide exchange factor 6-like isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
131458146
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
RA
PDZ_6
cNMP_binding
RA_2
PDZ_2
ABhydrolase-like_N
Motif
Other DBs
NCBI-GeneID:
131458146
NCBI-ProteinID:
XP_058482899
LinkDB
All DBs
Position
4:complement(22422019..22525797)
Genome browser
AA seq
1727 aa
AA seq
DB search
MSVLRWHRLSLLWKNWMFNQEPVEEQGQLSEAAEQEKAEPEQGLDLKNSTDVRTQILDCK
NQKSKTANQCVGFTDQNSVRKSEVLRRSCSEPCSKTSDCQDQCSSCPHTPESHSCKSHRS
GCSEEGVDSVLQVDNSSEGDDSFLQREGSQRRSRRRFRRVNPRGERELITDGQEPTGYST
LPADLNKMHLTDHAHQQVMHMPPSQSGCSIASDSGSSSLSDIYQATESELGDVDLSGLPE
AAVDSEEEEEEDEDLERASDTLLGRDLVRECLEKDPADRNDDDIEQLLEFMHQLPAFANM
TMSVRRDLCSVMVFEVVEQAGTVILHDKQELDLWYVILNGAVEISRAEGRMEMLCMGNSF
GISPSLEKQYMNGEVRTKGDDCQFVCIAQEDYWRILNHVEKNMHKVEEEGEIVMVKEHRE
LDRSGTRKGHIVIKGTPERLIMHLVEEPSVVDPTYIEDFLLTYRTFVSNPMEVGKKLLEW
FQVDTLRDTVTRIVLLWVNNHFNDFEGDPAMTRFLEDFEKKLETTKMKGHLRLLNIACAA
KAKWRQITLQKASRESALFFSVQGGSERGFGVFVESVEEGSKAAEAGLKRGDQIMEINGQ
NFENISISKAVDILRTNTHLSLTVKTNIFVFKELLSRIIHEKKNGGPHIPKIQEKKGNRF
SIPDLPGDMEFSTDHKSTRKMKANTVSGGRNKIRKMLEKTRFSILPPKPFRGLFGDGGMG
QSQDDSIVGTKQCRHSVAIMPIPGNLSSSSPDLLQPATSVLDFSNPAALGLYYIPDQVIR
VFKADQQSCYIIISKDTTAKDVVTHTVNEFGLIAAPETYSLCEVSVSPEGVIKQRRLPDQ
LSKLADRIQLNGRYYLKNNMETETLCSDEDAQDLLRESQISLLQLSTMEVAAQLSMRDFE
LFRNIESTEYVDDLFKLDSSVGSGNLKQFEEVINQETFWVATEILKEPNALKRMKTIKHF
IKIALHCRECKNFNSMFAIISGLNLAPVARLRSSWEKLPSKYEKLSGDLQDVFDPSRNMA
KYRNILSSQSMQPPIIPLFPVVKKDLTFLHEGNDSNVDGLVNFEKLRMIAKEIRHVVRMT
SANMDPALMFRQRKKRWKSLGSLSQGSTNSNMLDVQGGAHKKRVRRSSLLNAKKLYEDAQ
MARKVKQYLSNLTVESDEEKHQIMSLQCEPAYSTLSKNLSERRSTKSDMSPVSLRSALPS
GKTQNRVSQVLQVQVPLNPLRKKSTAKDIGTPNSNSPQVIKKPPVSSSEEWSSKRPSDDT
VSTISSLHSSPTVSPQGSPRKVGGVAKSHNSSHMNLSGSSSSLTSDASTKAGTASLRSYG
IGYALLPPGKADNLSDSSHSEISSRSSICSVDSVAAPGPDDRCNSSSSSSSRVCSTTANV
NAATANTAAAPAVESTATTTTTTHAVFNTDNSQPSTSSSSSARGYVTRGSTFTSSISTEE
LTPDHTSLDSVADSGRGSWTSCSSNSHDSFQSLPVSSCRPWDHGIHGHPLSLPHTHLGGF
KHTQLAGPIAEVTAAGHTAWASDAAATAKQNARDSGSDLSNQSRQSWASSSSLSDTYEGN
YGTVKRRNTSERPSSPTNEDGGQSTDPAYKTVTSSTEKGLIVYCITSPAKDERYRAPPPT
PPGYQGLALGDLDLTDGVVGGPGSPLPRPPHLKPPDYSVALQRSKLLQSPGAAGTLAEAR
RLAGNHHLPHQEVRTAGSTQSYSRPASICLPPKELADSEDDEQVSAV
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgctccgctggcaccggctctctctgctgtggaagaactggatgttcaaccag
gagccagtggaagagcagggccagctctcagaagctgccgagcaagaaaaagcagagcca
gagcagggcttagacttaaagaactcgacagatgtcaggacccagattttggattgtaag
aatcagaaatcaaaaactgcgaaccaatgcgtgggatttaccgatcagaactcggtccgt
aagtctgaagtattgagacgcagctgctctgaaccctgctccaagacgtcagactgccag
gatcagtgctccagctgtcctcacacgcccgaaagtcatagctgcaaatcccacagaagc
ggctgctctgaggaaggtgttgactctgtattacaggtggataacagcagcgagggggac
gacagctttctgcagagagagggatcccagcgcaggtccaggcggcgcttcaggagggtc
aaccccagaggagagcgggagcttatcactgacggccaggagcccaccggctacagcacg
ctgcccgcagacctcaataagatgcatctgacagaccacgcccaccagcaggtgatgcac
atgcctcccagccagtcgggatgcagcatcgccagcgactcggggagcagcagcctatcg
gatatttatcaggccacagagagcgagctgggagacgtggacctctccggacttccggag
gctgcggtggacagtgaggaagaggaggaggaagacgaggacctggagagagcttcggac
acgctcctgggccgagatctcgtacgagagtgtctggaaaaggacccggcggaccgcaac
gatgacgacattgagcaactactggagttcatgcaccaactgcccgcctttgccaacatg
accatgtcggtgcggcgagacctgtgcagcgtcatggtgttcgaggtggtggagcaggcc
ggcacggtcatactgcacgacaaacaagagctggacctgtggtatgttattctgaacggg
gccgtcgagatcagccgtgccgagggcagaatggagatgctgtgcatgggcaacagtttt
gggatctcgccgtcgctggagaagcagtacatgaacggagaggttcgcaccaagggggac
gactgtcagttcgtctgcatcgcccaggaggactactggcgcatcctcaaccatgtggag
aagaacatgcacaaggtggaggaggagggagagatcgtgatggtgaaggagcaccgcgag
ctcgaccgcagcggcaccaggaagggacacattgtcatcaagggaaccccggagcgtctg
atcatgcacctggtggaggagccgtccgtggttgaccccacgtacatcgaagacttcctg
ctcacctacaggaccttcgtgtccaatcccatggaggtcggcaagaagctgctggagtgg
ttccaggtggacactcttcgggacacggtaaccagaatagtgctgctgtgggtcaacaac
cacttcaatgactttgagggcgacccggccatgacgcggttcttggaggactttgagaag
aagctcgaaacaacaaaaatgaagggccatttgcggctgctgaacatagcgtgcgccgcc
aaggccaagtggcgacagatcactctgcagaaggcgtcccgggaatcggcactcttcttc
agtgttcagggtggcagcgagagaggcttcggcgtctttgtggagtcggtggaggaaggg
agcaaagctgcggaggccggactcaagcggggagatcagatcatggagatcaacggtcag
aactttgaaaacatttctatctcgaaagctgtcgacatcctgagaaccaacacgcatctc
tctctcacagtgaaaaccaacatctttgtcttcaaagagctcctcagcaggatcatacat
gagaagaagaacggcggccctcacattcccaagatccaggagaaaaaaggcaaccgcttc
tccatcccggaccttcctggagacatggagttctccacggaccacaagagcaccaggaag
atgaaggccaacaccgtgtcagggggacgcaacaagatcaggaagatgctggagaagacc
cgcttcagtattctgcctccaaagccgttcaggggcctgtttggtgacggcggcatgggt
cagtctcaagacgacagcatcgtgggcaccaagcagtgtcgacacagtgtggccatcatg
cccatccctggcaacctgtcgtccagcagccccgacctgctgcagccggccaccagcgtc
ctcgacttctccaaccctgcagccctgggactgtactacatccccgaccaggtgattcgt
gtgttcaaggccgaccagcagagctgctacatcatcatcagtaaggacacgacggccaag
gatgtagtcacccacaccgtcaacgagttcggcctcatcgccgcacccgagacttactcg
ctgtgcgaggtgtccgtcagccccgagggcgtcataaagcagcggcgcctgcccgaccag
ctctccaaactggccgatcgaatccagctcaacggcaggtactacctgaagaacaacatg
gagacggagacgctgtgctcagacgaggacgcacaggaccttctcagggagagtcagatc
tctttgctgcagctcagcaccatggaggtggcagcgcagctctccatgagagactttgag
ctcttcaggaacatcgagtccacagaatacgtggacgacttattcaagctggactcgtcg
gtggggagcggcaatctgaagcagtttgaggaggtgatcaaccaggagaccttctgggtc
gccacggagatcctgaaggagccgaatgccctgaagaggatgaagaccatcaagcacttc
attaagatcgccctgcactgcagagagtgcaagaacttcaactccatgttcgctatcatc
agcggcctgaacttggcaccggtggcgaggctgcgcagctcgtgggaaaagttgcccagt
aagtacgagaagctgtccggggacctgcaggacgtctttgacccgtccaggaacatggcc
aagtaccgcaacatcctgagcagccagagcatgcagcctcccatcatcccgctgttcccc
gtggtcaagaaggacctcacctttttacacgaaggcaatgactcgaatgtcgacggtctg
gtgaacttcgagaagctgaggatgatcgccaaggagatccgtcacgtggtgcgcatgacg
tctgcgaacatggaccctgcgctcatgttcagacagaggaagaagaggtggaagagttta
gggtctctgagtcagggcagcaccaactccaacatgctggacgtgcagggcggcgcccac
aagaagcgcgtgcgccgcagctcgctcctcaacgccaagaagctgtacgaggacgcacag
atggcccggaaggtgaagcagtacctgtccaacctgacggtggagtcggacgaggagaaa
catcaaattatgtcgctgcagtgtgagccggcctacagcaccttgtctaagaatttgagc
gagagacgctcgaccaagtcagacatgtctcccgtgtctctgcggtcggctttgccctcg
gggaaaacacaaaacagggtttcacaagtccttcaggtccaggtcccgctgaacccactg
aggaagaagagcacggccaaggacataggcacacccaactcaaattcccctcaggtgata
aagaagcctcccgtgagctcgtcagaggagtggagcagcaagagaccgtctgatgacacc
gtctccaccatctcctcccttcactccagccccacagtctcgcctcagggttcgccgcgc
aaagtgggaggcgtggccaagtcccacaactccagccacatgaacttgtcggggtcttcg
tcctcactgaccagcgacgccagcacaaaggccggaaccgccagcttgcgcagctatggc
ataggttacgctctcctcccacccggcaaagcagacaacctgtcagactccagtcacagc
gagatctcgtcccgctctagtatctgttccgtcgactctgtggcggctcccggccccgac
gaccggtgtaacagcagcagcagcagcagcagcagagtctgttccacgactgctaatgtt
aacgctgccactgcaaacacagcggccgctccagctgttgagagcacggcaacaacaaca
acaacaacacatgccgtgttcaacactgataacagccagcccagcacaagttcttcttca
tcggcgcgaggatacgtgacacggggctccaccttcacctcctccatctcgacagaggag
ctgacgccggaccacacctccctggactcggtggccgacagcggccgcggcagctggacg
tcctgctcctccaactcccacgactccttccagagcctccccgtctcctcctgccggccc
tgggaccacggcatccacggacacccgctctccctgccgcacacgcacctgggcggcttc
aagcacacgcagctcgccgggccgatagcggaggtcacggccgcgggtcacacggcgtgg
gcgagtgacgccgccgccaccgccaagcagaacgccagagactccggctcagacttgtcc
aatcagtcgcggcagagctgggcctcgtccagctcgctgtcggacacgtatgaggggaat
tacggcacggtaaagcggcggaacacctcagagcgcccctcctcgccgaccaacgaggac
ggaggccaaagcacagaccctgcctacaaaaccgtgacctcaagcacagagaagggcctg
atagtgtattgtatcacctcccccgccaaggatgagcgttaccgagctccccctcccact
cctccaggctaccagggtctggctctgggggatctggacctcacggacggtgtagtaggt
ggtccaggaagtcctctgcccagacctccgcaccttaaacctccagactacagcgtggcc
ttgcagaggagcaaacttctgcagagtcccggagcggccggcactctggcggaagcgcgg
aggctggcggggaaccatcacctgccccatcaagaggtgcggacagcgggttctacgcag
agctactccagaccggccagtatctgcctcccaccaaaggagctggctgacagtgaggat
gatgaacaggtatcagcggtgtaa
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integrated database retrieval system
