Solea solea (common sole): 131463594
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Entry
131463594 CDS
T10853
Symbol
kdm2ba
Name
(RefSeq) lysine (K)-specific demethylase 2Ba isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131463594 (kdm2ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131463594 (kdm2ba)
04121 Ubiquitin system [BR:
ssoe04121
]
131463594 (kdm2ba)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131463594 (kdm2ba)
Enzymes [BR:
ssoe01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
131463594 (kdm2ba)
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
131463594 (kdm2ba)
Ubiquitin system [BR:
ssoe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131463594 (kdm2ba)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
131463594 (kdm2ba)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
131463594 (kdm2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
DUF7885
F-box
PHD
LRR_4
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
131463594
NCBI-ProteinID:
XP_058491356
LinkDB
All DBs
Position
8:2217026..2226848
Genome browser
AA seq
781 aa
AA seq
DB search
MALSLSGDEEEYDSESEQQRAANRPKPKMGTTSAVKLPSNRSSSSARRRRTRCRKCEACL
RTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVCKEAGKEDTLEEEEEK
FNFMLMECSICNEIVHPNCLKVTDASGVVNDELPNCWECPKCNHAGKSGKVLKQKRGPGF
KYASNLPGSLLREQKPVKEEGDASTAAKRRPDREETPRNRPESLAESLHRQPPLLSPSSL
PRQRPEDRLRRKRKLFDDEEEDLILRKKEMSDDPYFSKLLHHIKTEEDEDAYKEEEEDGR
DPHFRNGAERRGRLGDAEEEADDRDSKNELFNRCVKTPVGDSDQSHCSSPQAGPSSEGSS
ETQEKGQRPKARRKRRLPNRELSRELSKALNQEIQKTEDCLANENRQPLKVEPETENEEP
KRLFRNGSDLGDPRPHLKSKEMNGTPWELRHFYPSQITPLGFNRSTPTNRPVPPRSPPKC
VQMERHVIRPPPISPPPDRLPLKDGKTHVIQREDWMKIFRFLSHKELCVCMRVCKTWNRW
CCDKRLWAKIDLNRCTSVTPLMLSGIIRRQPICLDLSWTNISKKQLSWLINRLPGLRVLK
LSGCSWAAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRCKLRNL
EDLRLAGLDITDTSLRLISRQMPLLSRLDLSYCNHINDQSVNLLTAAGTTTRDSLTEINL
SVCNRVTDHSLNFFKRCGSICQIDLRYCKQVTKAACERFIAEMSVSVPFRLREDKLLQKA
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccttgtcattgagtggagacgaagaggaatatgattcagagtcggagcagcagagg
gcagccaaccggccgaagcccaagatggggacgacgtcggccgtcaagctcccgtccaac
cgcagctcgtccagcgcgcggcgcaggaggacgcgctgccggaagtgcgaggcatgtctc
cggaccgagtgcggagagtgtcacttctgcaaggacatgaagaagttcggagggcccggg
cgcatgaagcagtcgtgcatcatgagacagtgcatcgcgcccgtcctgcctcacacggcg
gtgtgcgtggtgtgcaaagaggcggggaaggaggacacgctggaggaggaggaggagaag
ttcaacttcatgctcatggagtgctccatctgcaacgagattgtccatcccaactgcctc
aaggtgacggacgcgtcgggagtggtgaacgacgaactccccaactgctgggaatgtccc
aaatgcaaccacgcaggcaaaagtgggaaagtattgaagcaaaaaaggggtccagggttc
aagtacgcctccaacctccccggctctctgctgcgggaacagaagcctgtgaaggaggag
ggagacgcgtccaccgcggccaagaggaggccggaccgagaggagacgcccaggaaccga
cccgagtctctggcggagtctctgcaccgacagccgccgctgctgtctcccagcagcctg
cccaggcagagacctgaggaccgactgaggaggaagaggaagctgtttgacgacgaggaa
gaggatctcattttgaggaagaaggaaatgtcagacgatccatacttctccaaacttctg
caccacatcaaaacagaagaggatgaagacgcgtacaaggaggaggaggaagacgggcga
gaccctcacttccggaacggcgcggagaggagagggcgcttaggagacgccgaagaggaa
gcggacgaccgggactccaagaatgaacttttcaatcgctgcgttaaaacaccagtcggg
gacagcgaccagtctcactgcagctccccacaggccggccccagcagcgagggcagcagc
gagacccaggagaaaggtcagcgtccgaaagcgcgccgcaagcgccgcctcccgaaccgg
gagctgagccgagaactgagcaaagcactgaaccaggagatccagaagacggaggactgc
ctggccaacgagaaccgacagcccctcaaggtggagccggagacggagaacgaggagccc
aagaggctgttccgcaacggcagcgacctcggggacccgaggccgcacctcaagagcaag
gagatgaacgggacgccgtgggagctgaggcacttctacccgagtcagatcacgccgctg
ggtttcaaccggagcacgcccaccaaccggccggtgccgccgcggtccccgcccaagtgt
gtccagatggagcggcacgtcattcgcccgcctccgataagcccgccgccggaccggctg
cccctgaaagacgggaagacgcacgtcatccagcgcgaggactggatgaagatcttccgc
ttcctctcgcacaaggagctgtgtgtgtgcatgagagtctgcaagacgtggaacagatgg
tgttgtgataagagactttgggccaaaatcgatctgaaccgctgcacctccgtcactccg
ctcatgctcagcgggattatccggcgacagccgatctgcctcgacctcagctggaccaac
atctccaagaaacaattaagctggctcatcaacagactcccaggtctgcgggtgttaaag
ttatcgggctgctcctgggccgccgtgtccgcgctctgcacctccagctgtcccctgctg
cgcactctggacgtgcagtgggtcgagggactcaaagacgcacagatgagggacctgctc
tcgcccccaacagataatagaccaggtcagctggataaccggtgcaagttgcgtaacctg
gaggacctgcgcctggcggggctggacatcacggacacgtcgttacgcctcatcagtcgt
cagatgcccctgctgtccaggctggacctgagctactgcaaccacatcaacgaccagtcg
gtgaacctgctgacagcagcgggcaccaccaccagagattccctcacagaaatcaacctg
tccgtttgtaaccgtgtcacggaccattccctaaactttttcaagcgctgtggaagcatc
tgtcagatagacctccgctactgcaagcaggtgaccaaggcggcctgtgaaaggttcatt
gcggaaatgtccgtgagcgtcccgtttagactgagagaggacaaactgctgcagaaggcg
agctag
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