Solea solea (common sole): 131472509
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Entry
131472509 CDS
T10853
Symbol
ptcd3
Name
(RefSeq) small ribosomal subunit protein mS39
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ssoe03029
]
131472509 (ptcd3)
Mitochondrial biogenesis [BR:
ssoe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
131472509 (ptcd3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_mS39_PPR
PPR_2
PPR_3
PPR_long
TPR_24
Motif
Other DBs
NCBI-GeneID:
131472509
NCBI-ProteinID:
XP_058505764
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Position
14:7655921..7672088
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AA seq
668 aa
AA seq
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MAASGRHVGHYMQRNGRFLTNNLEQLWSHRSFGWTPSLRQTAVEANKESTENIVIPRKKT
WSKVAVLEALASTVGRDPTAFNYKFQDDSYLSPGTLTEFKLYSLSQESGRTAAKFFINSN
PKFFTEDFAEPHIPCLMPETVSPLIEEVSEEALKERINLRRVKAAVDLYDQLLQAGTTVS
MKTTHDLLDLICLYCDKNPVQEGDTEAEDVEAVEGRNKRKVKLREYLDSQECTWKENNSA
ERIFNVLPERDAHCYAALIRGMVKHGAYAKAFSMYTDLLNERLTADVHVFNALILAAPHV
QDKYSERWNLIEDLLKQMNQQKVQPNLLTFNCVLKSLRLCGSLGKAKALHTLNEMMAVGI
APSLASFEHILVLFHRSGSSGQPPTDLLQDILSEIKGTSFTCQDPEDDRFFSFAMKVCLD
AKDMELGYKVQSLAEVGNNWRLLGDPYLQGIYYGRFFSLLCLMEHIDVILKWYKQLVPSL
YYPSFQSCKGLLQALDADNRLDLLPQLWKDFRSLGHDKRPQLVEELLTLMAREKHSPEVQ
ERFAECALDIKGVYDDERGRTSLQWNATSLTHITSLLLRANKTQQAWEMLQLFTSNNRVP
PDELLKNFLSVCHSSGSVQTAVDLVQLSAAFCLPATAELAKQTLADFKLTEEQRAVVSEL
ASTGESFD
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtccgggaggcacgtagggcactatatgcagagaaatggacgctttttgaca
aataacttggagcagttgtggagtcacaggagttttggttggactccatctctgcgacaa
acagctgtggaggctaataaagaatctacagagaatattgttatccccagaaagaaaaca
tggagcaaagtggctgtgctggaggctctggcttcgactgttggcagggatcctacagca
ttcaactataagttccaggatgattcttacctctctcctgggaccttgactgagtttaaa
ttgtacagtctctcacaggagtctggcagaacagcagccaaattctttatcaacagcaat
cccaagttcttcactgaagactttgctgagccgcatataccatgtctgatgccagagacg
gtgtcaccgcttattgaggaggtgagcgaggaggctctgaaggaacgaatcaacctgagg
agagtcaaagctgctgttgatctgtatgaccagctactgcaagctggcacaaccgtttcc
atgaaaacaacccatgacctgttagatctaatctgtctttactgtgacaaaaaccctgtc
caggagggggacacagaggcagaggatgtggaggcggtagaaggcagaaacaagaggaaa
gtgaagctccgtgagtatttagactctcaggagtgcacctggaaagaaaacaacagtgca
gagagaatctttaatgtgctgccagagagagacgcacactgttacgctgctctaatcaga
ggcatggtgaagcatggagcctacgccaaggccttcagcatgtacactgacttacttaac
gaaaggttgactgctgatgtccatgtcttcaacgcactgattttagcagctcctcatgtc
caagacaaatacagcgagcgatggaacctgattgaggatttactgaagcagatgaatcaa
cagaaagttcagcccaacctgctgaccttcaactgtgtcctgaagtctctgagactgtgt
ggctctttgggcaaagcaaaagctctgcataccctgaatgagatgatggctgtgggaata
gctcccagtctggcctcctttgagcacatcctggtactctttcacagatcaggctcctct
ggtcagcctcctactgacctcttacaggatatcttgtcagaaattaaagggacaagtttc
acatgtcaggaccctgaagatgatcgattcttctcttttgcaatgaaagtatgtctggac
gctaaagacatggagctgggttataaagtacagagtctcgcagaagtgggtaataactgg
aggttgctgggagatccctacctacagggtatttattacggtcgcttcttcagtctgttg
tgtttgatggagcacattgatgtcatcttgaagtggtacaaacagcttgttccctcgtta
tactacccaagctttcaatcgtgtaaaggcctgctacaggctctggatgcagacaaccgc
cttgatttgctgccccaattatggaaagacttcagatctcttggtcatgataagaggcca
cagctggtggaggagttgctcacactcatggccagagagaagcacagccctgaggttcag
gagaggtttgcagagtgtgctctcgatataaagggtgtgtatgacgatgaaagagggagg
accagtctgcagtggaacgctacctccctcacacacatcacctcactgctgctgagagcc
aacaagacccaacaggcctgggagatgctgcagctctttacgtccaacaacagagttcca
cctgacgagctgttgaagaacttcctgtcagtgtgtcacagcagtggttctgttcagaca
gcagtggacctggtgcagctgtctgcagccttctgtctgcctgcaacagcagagctggca
aaacaaacactggcagacttcaaactgaccgaggagcaaagagccgttgtatctgaactg
gcgtcaacaggagaatcatttgactga
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