KEGG   Solea solea (common sole): 131473974
Entry
131473974         CDS       T10853                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ssoe  Solea solea (common sole)
Pathway
ssoe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssoe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131473974 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssoe03041]
    131473974 (smndc1)
Spliceosome [BR:ssoe03041]
 Complex A
  U2 snRNP components
   U2 related factors
    131473974 (smndc1)
 Complex B
    131473974 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    131473974 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR AATase PUA_4 DUF2067 Plasmid_RAQPRD
Other DBs
NCBI-GeneID: 131473974
NCBI-ProteinID: XP_058507628
LinkDB
Position
15:22503084..22507860
AA seq 238 aa
MSDDLMKQLNSYKAQLQQVEVALSTDQDNEDLQKLQKDLQEVIDLTKDLLTSQPAEAASS
KEAVDIVPQKQSWGVGDRCLAVWNQDGQVYEAEIEEIDRENGTAAVTFSGYGNAEVIPLV
NLKEPEERRRSDEDGKPKSKKEQIAEQREYKKKKAQKKVLRMKELEQEREVQKSKWQQFN
NKAYSKNKKGQVRVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggacgatttgatgaaacagctcaacagctacaaagctcagctgcagcaagtagag
gttgctctatcgaccgaccaagataatgaagacctacaaaaactccagaaagatttacag
gaagtcatcgatttgacaaaagacctcctgacctcacagcccgctgaggctgcctcaagt
aaagaggccgtagacatagtcccccagaaacaaagctggggcgtgggggacaggtgtttg
gctgtgtggaatcaggacggacaggtgtatgaggctgagattgaggagatagaccgggaa
aatggaactgcggccgtgacgttttctggatatgggaacgccgaggtgatccctctggtg
aacctcaaagaaccagaggagcggaggcgctccgatgaggatggaaagcccaaatcaaag
aaagagcaaatagctgagcagagagagtataagaagaagaaagcccagaagaaggtgctg
aggatgaaggagttggagcaagagagggaggtacagaagtcaaagtggcagcagttcaac
aacaaagcctactcaaagaacaagaaaggacaggtgagggtcaagaggagcatatttgca
tctccagaaagcgtaaatggaaaggttggagtgggaacgtgcggtattgccgacaaacct
atgacccagtaccacgacacgtcaaagtacaatgttagacatttaatgccacaatga

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