Solea solea (common sole): 131475886
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Entry
131475886 CDS
T10853
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
ssoe Solea solea (common sole)
Pathway
ssoe04010
MAPK signaling pathway
ssoe04020
Calcium signaling pathway
ssoe04510
Focal adhesion
ssoe04540
Gap junction
ssoe04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
131475886 (pdgfab)
04020 Calcium signaling pathway
131475886 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131475886 (pdgfab)
04540 Gap junction
131475886 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
131475886 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssoe04052
]
131475886 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
ssoe00536
]
131475886 (pdgfab)
Cytokines and neuropeptides [BR:
ssoe04052
]
Cytokines
Growth factors (RTK binding)
131475886 (pdgfab)
Glycosaminoglycan binding proteins [BR:
ssoe00536
]
Heparan sulfate / Heparin
Growth factors/receptors
131475886 (pdgfab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
131475886
NCBI-ProteinID:
XP_058510234
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Position
16:15109097..15128022
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AA seq
229 aa
AA seq
DB search
MRAALCHFLLWTAYLLLVNAEKEVEFPQELIDRLSHSEIHSISDLQRLLDIDSVGTGNDV
IEQPKPHRHHNHHKNYSRHHGHYNDLKSSQLHSRRKRSIVEEAVPAVCKTRTVIYEIPRS
QVDPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHYRTVKVAKVEYVRRKPKLKEVF
VRLEDHLECVCTSQHHVVEHSEAETGHRRAKGKKRKPKRLRPSKDLLAT
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcactttgtcacttccttttgtggacggcgtatctgctgctggtcaacgct
gagaaggaagtggagtttccccaggagctgatagacagactgtctcacagtgaaatccac
agcatcagcgacctccagcggctactggacattgactccgtaggtacgggaaatgatgtt
atcgagcagcccaagccccacagacaccacaaccaccataagaactactcccggcaccat
ggtcactacaatgacttgaagagctcccagctccacagcagacgcaagaggagtattgta
gaggaggcggtcccagcggtgtgtaagacgcggacggtgatctacgagatccccaggagc
caggtggatcccacgtctgccaacttcttaatatggccgccctgcgtggaggtgaaacgc
tgcacgggctgctgcaacaccagcaacatgcgctgccacccttcccgcaagcattaccgc
accgttaaggtggccaaggtggagtatgtcaggaggaaacccaagctgaaagaggtcttt
gtgcggttagaagaccacctggagtgcgtgtgcacatcgcagcatcatgtggtggagcac
tcagaagcagaaacaggccaccgtagggctaaaggtaaaaaaaggaaacctaaaaggcta
aggcccagcaaggatttattggcgacataa
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