Solea solea (common sole): 131475961
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Entry
131475961 CDS
T10853
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131475961 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssoe03041
]
131475961 (eftud2)
Spliceosome [BR:
ssoe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
131475961 (eftud2)
Complex C
U5 SnRNP specific factors
131475961 (eftud2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Roc
Ras
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
131475961
NCBI-ProteinID:
XP_058510348
LinkDB
All DBs
Position
16:10364466..10377943
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AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDEDELDAEDRDVDEGDDDDDDEPADADDDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKNRRFTLMEQELPATVYDMEFLAD
LMDGTELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSMRLSDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDIIYNEFAKRLWGDIYFNPKTRKFTKKAP
SSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVHHIPSPQEGAKTKIEHTYAGGMDSDLGEAMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWINVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDALIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatctgtatgatgagtttggaaactacatcggtccagagttggactctgat
gacgatgaagacgagctggatgcagaggacagagatgtcgatgagggtgatgacgatgat
gacgatgaacctgctgatgctgatgatgacgtcccgggaatggaggtggttctgcacgag
gataagaaatactatcctacagcagaagaagtttacggtcctgaagtggaaacgatcgtc
caggaggaagatactcaacctcttactgaacccatcattaagcctgtgaaaaacagacgg
ttcactctgatggagcaagagttacctgccactgtttatgatatggaattccttgcagat
ctaatggacggtactgagttgatccggaatgtcactctctgtggtcacctccaccatggc
aagacctgttttgtggactgcctcattgaacagactcacccagaaatcaggaagagagat
gatgtggatcttcgatacacagatatcctattcacagagcaggagagaggagttggtatt
aagagtactcccgtcacaatggtgctgccagactctagaggcaaatcttacctctttaac
atcatggacacaccaggccatgtaaacttctcagacgaggtcacgtctagcatgcggctc
tcggatggtgttgtcctcttcatagatgcagcagagggagtaatgctgaacacagagagg
ctcatcaaacatgcagttcaggagcgtatggccatcaccatctgcatcaacaaggtggac
cggctcatcgtggagcttaaactgccacccacagatgcttattataaactgcgccatatt
gtagatgaggtcaatggtttgctcagcacatactccacagatgagaatttggtggtgtct
cctctccttggaaacgtgtgcttcgccagctctcagtacagcatctgtttcacacttggc
tcttttgcaaaaatctactcagacacttatggagacatcatctataatgagtttgccaaa
aggctctggggagacatttacttcaatcccaaaactcgcaagttcacaaagaaagctccc
agcagcaactctcagcgcagctttgttgaatttgttctggagcctctctacaagatcctc
tcacaggtggttggggatgtagacacatccctccccagagttctggatgagctgggaatc
catctaaccaaagaggaactgaagctgaacattagacccctgctgaggctggtctgcaat
cgcttcttcggagaattcaccggctttgtggacatgtgtgttcaccacatcccttcacca
caagagggtgccaagaccaagattgagcacacctacgcaggaggtatggactccgacctg
ggggaggccatggcagagtgtgaccctgatggtcctttgatgtgccacaccactaagatg
tacagcactgaggatggggttcagttccatgcatttggcagggtgctaagcggcaccatt
caggcaggacagccagtcaaggtcttgggagagaactacacccttgaagatgaggaggac
tcccaggtctgcactgtgggacgcctgtggattaatgtcgccagatatcaaatagaagtg
aatcgagtacccgctggtaactgggtcctcattgaaggctgtgaccagccaattgttaaa
actgccaccatcacagagcccagaggcaatgaagaggctcagattttcaggccgctgaag
ttcaacactgcgtcagttatcaagatcgcagtggaacccgtcaacccatcggagcttccg
aaaatgctggacggactgaggaaggtcaacaagagctatccatctctaaccacaaaggtg
gaggagtctggagaacacgtaatcttaggcacaggagagctctacttggactgtgtcatg
cacgacctgaggaagatgtattcggagatcgacattaaagttgcagatccagttgtgact
ttctgtgaaacagttgtggaaacatcatctctcaagtgctttgctgaaacgccaaacaaa
aagaataagatcaccatgattgctgagcccttggagaaggggctggctgaggacattgag
aatgaagtggtgcagatcacgtggaacaggaagaagctgggagagtttttccagacaaag
tacgactgggatctgctggctgccaggtctatctgggccttcggaccggacacgacgggg
ccaaacattcttgtggacgacacgctgccttctgaggtggacaaggctctgctcggctca
gtcaaagacagcatcgttcagggcttccagtggggaaccagggaaggacctctgtgtgat
gagcccatcaggaatgtcaagtttaagatcctggatgcactcatcgctcaggagcctctc
cacagaggcggaggccaggtcatccccacagctaggagagttgtctactccgctttcctc
atggccactccaaggctgatggagccatactactttgtggaggttcaggctccagcagat
tgcgtatctgctgtgtacactgtgttggctcgaagaagaggtcatgtgactcaggacgca
ccgattccagggtctccactctacaccatcaaagctttcatcccagccatcgactccttt
ggcttcgagacagaccttcgcacacacacacagggacaagcctttgctctgtctgtcttc
caccactggcagattgttcctggtgaccccctggacaagagtatcgtgatcaggccactt
gagcctcagcccgccccccacctggccagagagttcatgatcaagacccgaaggcgcaag
ggtctgagcgaagatgtgagcatcagcaagttcttcgacgatcctatgttgttggagctg
gccaaacaggatgtggtgttgaactaccccatgtga
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