Shewanella spartinae: K0I31_05880
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Entry
K0I31_05880 CDS
T09209
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sspa
Shewanella spartinae
Pathway
sspa01501
beta-Lactam resistance
sspa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I31_05880
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I31_05880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspa03036
]
K0I31_05880
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sspa02000
]
K0I31_05880
01504 Antimicrobial resistance genes [BR:
sspa01504
]
K0I31_05880
Chromosome and associated proteins [BR:
sspa03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
K0I31_05880
Transporters [BR:
sspa02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K0I31_05880
Antimicrobial resistance genes [BR:
sspa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I31_05880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RND-MFP_C
BSH_RND
Beta-barrel_RND
HH_MFP_RND
YknX_C
BSH_CzcB
Beta-barrel_RND_2
CzcB_C
BSH_CusB
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QYJ94918
LinkDB
All DBs
Position
1323999..1325156
Genome browser
AA seq
385 aa
AA seq
DB search
MLGRNASPLARLTLFSTALLLSACGKAPAPGPAVMPSVIVNTAQVKEIRAKTEIVGRTRA
SEDVVIKSQIQGQLLKRTFVEGEDIDAGELLFEIDPSTFEAELAQQQAVLKQAIASRDVA
VMNWERGRRLLPDGMISAQDMDELTSRKLTTAAGVVQAEAAVKAAELQLSYTKVYAPISG
RISGAKVSQGDIITPQSELASLVQLQPMWVNFQVAEKTIISAKQNFSKAAKHEVKISDIV
IRLRLPNGTMFDETGYIDFISNRVDAATGTLELRATFNNESKLMLPGLFVTLVIESPISE
QAILIPQAAVQEDQQGRFVMVLDGDNKVQKRVVELGDRFGVDWRVLSGLNEGERIVVDGL
QKIRPGIEVKAVEQQAVPFQEANDA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcttggtagaaacgcttcacctctcgctcgactcaccctgtttagcacggcgctgctg
ctctcggcttgcggcaaggcgccggcccccgggcccgccgttatgcccagcgtgatagtc
aacaccgcccaggttaaggagatccgcgccaagacggagatcgtcggtcgcacccgggca
tcggaagatgtggtgatcaagtcgcagatccaggggcagctgctgaagcgtacctttgtc
gagggggaagacatagatgccggcgagctgctgtttgagatagacccctccaccttcgag
gccgagctggcgcagcaacaggcggtgctcaagcaggccatcgcctctcgcgatgttgct
gtgatgaactgggagcgtggccgtcgcctgctgcccgatggcatgatcagcgcccaggat
atggacgagcttaccagtcgtaagctgaccacggcagcgggtgtggtgcaggccgaagcg
gcggtgaaggccgccgagttgcagctcagctataccaaggtttacgcccccatctcgggc
cgcatcagcggcgccaaggtgagtcagggggatatcatcacgcctcagtctgagctggcc
agcctggtgcagttgcagcccatgtgggtcaacttccaggttgccgagaagaccatcatc
tccgccaaacagaatttttccaaggccgccaaacatgaggtgaagatctcggatatcgtg
atccgcctgcgtctgcccaacggcaccatgttcgacgagactgggtatatcgactttatc
agcaatagggtcgatgccgccaccggcaccctggagctcagggccaccttcaataatgag
agtaagctgatgctgcctgggctgtttgtgactctggttatcgagtcccccattagtgag
caggccattttaattccacaggcggcggtgcaggaagatcagcagggacgtttcgtcatg
gtgctggatggtgacaacaaggtgcagaagcgggtggtcgaactgggtgatagattcggc
gtcgactggcgcgtgctcagtggcctcaacgagggtgaacgtatcgtggtggatggtctg
cagaagatccgtccgggtatcgaggtgaaggctgtcgagcagcaagcggtgcctttccaa
gaagctaacgatgcctaa
DBGET
integrated database retrieval system
