KEGG   Shewanella spartinae: K0I31_09560
Entry
K0I31_09560       CDS       T09209                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
sspa  Shewanella spartinae
Pathway
sspa01501  beta-Lactam resistance
sspa01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:sspa00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    K0I31_09560
   01503 Cationic antimicrobial peptide (CAMP) resistance
    K0I31_09560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sspa03036]
    K0I31_09560
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sspa02000]
    K0I31_09560
   01504 Antimicrobial resistance genes [BR:sspa01504]
    K0I31_09560
Chromosome and associated proteins [BR:sspa03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    K0I31_09560
Transporters [BR:sspa02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   K0I31_09560
Antimicrobial resistance genes [BR:sspa01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    K0I31_09560
SSDB
Motif
Pfam: Beta-barrel_RND_2 YknX_C BSH_RND RND-MFP_C BSH_CzcB Beta-barrel_RND CzcB_C BSH_LcnD HH_EMRA BSH_YknX HH_MFP_RND DUF7801
Other DBs
NCBI-ProteinID: QYJ95572
LinkDB
Position
2131684..2132769
AA seq 361 aa
MKKTIIISMLLAAGAATYYFTQQTETPKGPRGRPTPNVVVAKAEMQPIRDEVEALGTGKA
NESITVTPKVTDMVTEINFNDGQMVDKGQLLVRLQDREQIARVTVARVKMKDHERELARI
SSLVTSQTVAALERDRLQTLIDTAKAELEQAESSLKDRRILAPFSGRLGLRQVSQGSLVT
PGTVITTLDDISTIKLDFSVPERFLQSLAIGKSVEASAVAFEGELFTGKVVSVDSRINPT
TRAVTVRAEIPNKGMRLLPGMLMKVKLIKQSREALIIPEAAIIPIQKDHFVYLVNDENVV
ERRQVQLGLRKRGWVEIVGGVDVGEQVMVRGILKVRPGDTVKVQYSEHFSFNQQAKVEPL
A
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaaaaaaacgataataatctcaatgcttttagcggcgggcgccgccacctactatttc
actcagcaaaccgaaacgcctaaggggccacgcgggcggcctacgcctaacgtggtagtg
gcaaaggccgaaatgcagccgattcgtgacgaggtcgaggccctgggaaccggtaaggcc
aacgaatcgatcactgtaaccccaaaggtcaccgacatggtgaccgagattaatttcaac
gacggccagatggtcgataagggccagcttctggtgcgtttgcaagacagagagcagatc
gcccgcgtgactgtggcccgggtgaagatgaaagaccatgagcgcgaactggcgcgtatc
agctccttggtcaccagtcagacggtggcggcactggagcgcgacaggctgcagaccctt
attgatactgccaaggccgagctggaacaggcagaatcttccctcaaggacagacgcata
ctggcgccattttctggacgcctgggtctgcgtcaggtgagtcagggcagcctggtaacc
ccaggtacagtgatcaccacgttagatgatatctccaccatcaaactggacttctccgtg
ccagagcgcttcctacagtctctggcgataggtaagtcggtcgaggccagtgccgtggcc
ttcgaaggcgaactcttcaccggtaaggtggtctctgtcgatagccgcatcaatccgacc
acccgcgccgtgaccgtgcgggccgagatccccaacaagggaatgcgtctgctacccggc
atgttgatgaaggtgaagcttatcaagcagagccgcgaagcactcatcatccctgaggcg
gcgattatcccgattcagaaagatcacttcgtctatctggtgaatgatgagaacgtggtc
gagcgtcgtcaggtgcaactaggtctgcgtaaacgcggctgggttgagattgtcggcggc
gtcgatgtcggtgagcaggtgatggtgcgcggcattctcaaggtgcgcccaggcgatacc
gtcaaggtgcagtacagcgaacatttcagtttcaaccaacaagcgaaggtggagccgcta
gcatga

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