Shewanella spartinae: K0I31_09565
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Entry
K0I31_09565 CDS
T09209
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sspa
Shewanella spartinae
Pathway
sspa01501
beta-Lactam resistance
sspa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I31_09565
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I31_09565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sspa02000
]
K0I31_09565
01504 Antimicrobial resistance genes [BR:
sspa01504
]
K0I31_09565
Transporters [BR:
sspa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0I31_09565
Antimicrobial resistance genes [BR:
sspa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I31_09565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF6286
Motif
Other DBs
NCBI-ProteinID:
QYJ95573
LinkDB
All DBs
Position
2132766..2135894
Genome browser
AA seq
1042 aa
AA seq
DB search
MILTDLSVKRPVFASVISMLLIAFGLVSFDKLPLREYPNIDPPIVSVQTNYRGASAAVVE
SRITQLVEDRISGVEGIRNINSSSSDGRSSVTLEFDVGRDIEAAANDVRDRISGLLNNLP
EEADPPEVQKANGGDEVIMWLNLVSDQMNTLQLTDYARRYLVDRFSVIDGVANIRIGGGK
VYAMRVWIDRQALAARNLTVSDIESVLRSENVELPAGSVESQDRHFTVRLERTFKTAEDF
NNLVLAEGEDGYLIKLGDVARVEIGSEEERITFRGNREAMIGLGISKQSTSNTLEVARAA
NALVDKINPTLPAGMEIKRSYDSSVFIEASIKEVYQTLFIAMFLVIVVIYLFLGSVRAML
IPALTVPVSLMATFIVLYALGYTINLLTLLAMILAIGMVVDDAIVVLENIHRRIEEGDSP
LKAAYLGSREVAFAVVATTLVLVAVFMPITFLEGDLGKLFKEFAVAMSAAVIFSSLVALT
LSPMMCSKLLKPAGQDPWLVRKIDAGMNWLSAGYRATLKRAMVHPFIVSSLVVIALGLSG
YLMTKVPQEFAPQEDRGSMFLIVNGPQGASFEYISPYMDEIENRLMPLVDSGDIKRLLIR
APRGFGRSANFSNGMAIIVLEDWADRRSAFEIIGDIRARLSDLAGVRAFPVMRQAFGRGV
GKPVQFVLGGPSYEELAKWRDILLEKAKENPNLVGLDHDYQETKPQLRVVIDKDRAADLG
VSISHIGRTLESMLGSRLVTTFMRDGEEYDVIIEGNRDNQNTASDLSNIYVRSDRSRELI
PLANLVSVEEFADASQLNRYNRMRAITIEANLADGYSLGEALDYLNNLAYTYLPAEAVIS
YKGQSLDYQESGSSMYFVFLLALGIVFLVLAAQFESYIHPMVIMLTVPLATLGALIGLWV
TGQSLNIYSQIGIIMLVGLAAKNGILIVEFANQLRDKGIEFDTAIIQAASQRLRPILMTG
ITTAAGAIPLVLAQGAGAETRFVIGVVVLSGIILATFFTLLVIPVAYGLIARNTGSPEEI
SQRLDAELAQDQHHESGLRNAD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgatcttgacggatttgtcggtaaaacgaccggtttttgcgtccgtcatcagcatgtta
ttaatcgccttcggtctggtttccttcgataaactcccactgagggagtatcccaatatc
gatccgccgatcgtctcggtacaaaccaactatcgcggcgccagtgccgccgtggtggag
agtcgcatcacccagctggtggaagacaggatcagcggcgtcgaagggatccgcaacatc
aactcctctagcagcgacggtcgctcatccgtaaccttagagttcgacgtcggccgtgat
atcgaggcggcggccaacgatgtccgtgatcgtatctcgggcctgctcaacaacctgccg
gaagaggccgatcccccagaggtacaaaaagccaacggtggcgatgaggtgatcatgtgg
ctcaacctggtctcggatcagatgaacaccttgcagctcaccgactatgcccgccgttac
ctggtagatcgcttctcggtgatcgatggtgtggcaaatatacgtatcggtggtggtaag
gtgtacgccatgcgggtgtggatcgacaggcaggccctggcggcccgtaacctgacggta
tcggatatcgaatctgtgctgcgctcagaaaacgtcgagctgccggctggttcggtggag
tctcaggacagacacttcaccgtgcgtctagagcgtaccttcaagacggcggaagatttt
aacaatctggtgctggccgaaggggaagatggttacctcatcaagctgggtgacgtggcc
agggtggagattggctcggaagaggagcgtattaccttccgcggtaaccgcgaggccatg
ataggccttgggatctccaagcaatcgacctccaacactctggaagtggcccgcgccgcc
aacgccctggtggataagatcaatccgacactgcctgccggcatggagatcaaacgctcc
tacgacagctcagtgtttatcgaggcctccatcaaggaggtgtatcagaccctgttcatc
gccatgttcctggtgattgtggtgatctatctcttcctgggcagcgtgcgcgccatgttg
atcccggcgctgacggtacccgtttccctgatggcgacctttatcgtgctctacgccctg
ggttacaccattaacctgctgaccctgctggcgatgattctggctatcggcatggtggtg
gatgatgccatcgtggtgctggaaaacatccacagacgcatcgaggagggcgactcgccc
ctcaaggcggcctacttaggttctcgcgaggtggcctttgccgtggtggcgactactctg
gtgttggtggccgtctttatgccaatcaccttcctcgagggagatctgggtaaactcttt
aaggagtttgcggtggccatgagcgccgcggtgatcttctcgagtctggtggccctgacc
ctaagccccatgatgtgctctaagctgcttaagcctgccgggcaagatccttggctggtg
cgcaagatagatgcaggcatgaactggctgtcggccggttaccgtgcaacgcttaagcgc
gccatggtccacccctttatcgtcagctcgctggtggttatcgccttagggcttagcggc
tatctgatgactaaggtgccgcaggagtttgcgcctcaggaggataggggatctatgttc
cttatcgttaacggtcctcagggagcaagcttcgagtatatcagcccctacatggatgaa
attgaaaatcgcctgatgccgctggtggacagcggtgacatcaagcgtctgcttattcgt
gcgccgcgcggctttggtcgcagtgccaacttctctaacggcatggcgatcatagtactg
gaagactgggcagaccgtcgcagcgccttcgagatcataggtgacattcgtgcccgtctg
tcggatctcgccggtgtgcgcgccttccccgtgatgcgtcaggccttcggccgcggcgtg
ggtaagccggtgcagttcgtgctgggaggcccaagctatgaagaactcgccaagtggcgc
gacatcttgttggagaaggctaaggagaatcctaacctggtcggcctggatcacgactat
caggaaaccaagcctcagctgagggtggtgatagacaaagatagggcggcggaccttggg
gtctctatctcgcatataggacgcacgctcgagtctatgctgggctcgcgtctggtgacc
acctttatgcgtgacggcgaagagtatgacgtgatcatcgagggtaaccgggataatcag
aataccgccagcgatctgagcaacatctatgtgcgctcggaccgcagccgtgagctgatc
ccgcttgctaatctggtctcggtagaggagtttgccgacgccagccagttaaaccgctac
aaccgtatgcgcgccattaccatagaggccaacctggccgatggttatagcttgggtgag
gcgctagattaccttaacaatctggcatacacctatctgccggccgaggcggtgattagc
tacaaagggcagtctctggactatcaggagtctggcagctctatgtatttcgtcttcctg
ctggcgctgggtatcgtcttcttggtactcgcggcccagttcgagagctatattcaccct
atggtgatcatgctgaccgtacctctggccaccttgggcgccctaatcggcctctgggtg
acaggccagagcctgaacatctatagccagataggcatcatcatgctagtggggctggcg
gccaagaatggtatcttgatcgtcgaatttgccaaccagctgcgggataaagggatcgaa
ttcgacactgcgatcatccaggcggcaagccagcgtcttcgtcctatcctgatgacgggg
atcaccacggcggccggtgctattccgctggtgttggcccagggcgccggcgccgagaca
cgcttcgtgatcggcgtggtggtgttgtcgggtatcatactggcgaccttctttacgctg
ctggtgatcccggtggcctatggcctgatcgccagaaataccggttcgccggaggagatc
agtcagcgattggacgccgaactagcacaagatcaacatcacgagtcaggcctgagaaat
gccgactag
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