Shewanella spartinae: K0I31_19810
Help
Entry
K0I31_19810 CDS
T09209
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sspa
Shewanella spartinae
Pathway
sspa01501
beta-Lactam resistance
sspa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I31_19810
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I31_19810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sspa02000
]
K0I31_19810
01504 Antimicrobial resistance genes [BR:
sspa01504
]
K0I31_19810
Transporters [BR:
sspa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0I31_19810
Antimicrobial resistance genes [BR:
sspa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I31_19810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QYJ93784
LinkDB
All DBs
Position
complement(4560726..4563854)
Genome browser
AA seq
1042 aa
AA seq
DB search
MADFFINRPKFAIVLSIVLTLAGLLSLARMPVSQFPSIVPPSIEVFAVFPGADHNTIRNT
VASVIEQEINGVEDMIYIESKSNNDNTYLAYVTFAIGTDPDKAQVLVQNRVNKAMAKLPE
EVKRQGVTVEKVANSILMTVNTYSPNGSHDNLYLSNYASLNIKDALLRVKGVGKVQVIGE
QNYSMRVWLNPEKMAAKAITANDVAAAISAQNTTVAAGKLGERPSSGNQVFQYTIQTKGR
LVDVEEFENIILRADNQAGFITLKDVARVELAAEQYSAMATYGKNESPILAIYQAPGANA
LEVAEGVRAEMERLSQRFPADMEHVISYDSTTFIEVSMDEVFETLYIAIGLVVVVTFLFL
QSWRATLIPSIAIPVSLIGTFVVMAAMGIDINTISMFGLILAIGVVVDAAIVVIENVERL
MSEEHLDSKAATSKAMKEVTAPLIASALVLLAVFGPVSFAPGLVGQMYQQFGVTISVSTV
ISTVVALTLTPALCAALMRHEAPKTRGPLAWFNQFINRLTNGYVSSVGFFGKRLMLSGAL
LALLMGAIVLLGDNMPKGFIPAEDQGSFMVDMNLPEASALDRTDKMVDEMISEVSALEGV
KHVVAAKGYSLLKGASSSNSGMMIVVLDDWSERQTAETSEFALVAQVQAIIDQNKDVTGM
AFSMPAIPGLGNAGGLTLQVEDLSGRSVEQMAPALDGYLAALNDADEIAMAFTTYSANVP
QLYLDVDRAKAMALGVDLNEVNSTLSAMMGNMYVNDFTKFGKNYQVNLQAEQSYRSQEKD
LEQIYVRALSGEMVKLSSFASYKPLVGSDNTARYNLYNTAQVIAIPADGYSSGEAIAAME
QIADTSLPQGYAYEWTGMTYQELQAGDSAPILFALALLFTYLFLVAQYESWMIPLAIILC
VPTALFGALGFTALAGGSINLYTQVGLVLLIGMASRNAILIVEFAKVLREEKGLSIMEAA
KQAIALRLRAVLMTAFSFILGVVPLVIASGAGSASRNALGIASFGGMLIATVIGCLLVPI
CFIALQRLRELRRSPEATEVTA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggccgatttcttcattaatcgccccaagttcgccatcgtactctcgattgtgctgacc
ttggccggcttactcagtctggcaagaatgccagtatcgcaatttcccagcatagtgccg
ccctctatcgaggtgtttgccgtgttccctggtgccgaccataacaccatacgcaacacg
gtcgcctcggtgatcgagcaggagatcaacggcgtcgaggacatgatctatatcgagtcc
aagtcgaacaacgataacacctacctggcctatgtgacctttgccattggcacagatccc
gacaaggcccaggtgctggtgcagaaccgggtcaacaaggcgatggccaagttacccgaa
gaggttaagcgtcagggggtgacggtcgagaaggtggcaaactccatcttgatgacggtc
aacacctattcgcccaacggcagccatgacaacctctacctgtctaactatgcctcgctc
aacatcaaagacgccctgctgagggtgaaaggtgtgggcaaggtgcaggtgatcggtgag
cagaactactcgatgcgcgtctggctcaacccagagaagatggccgccaaggcgatcacc
gccaacgatgtggccgcagccatcagcgcacaaaacaccacggttgccgccggtaagctg
ggcgagcgtccttcatccggtaatcaggtattccaatacacgattcagaccaagggccgc
ctggtggatgtcgaggagtttgaaaacatcatactgcgtgccgacaaccaggccggtttc
atcacactgaaagacgtggcccgtgtcgagctggcggcggagcaatactctgccatggct
acctacggcaagaatgagagccctatcctggccatctaccaggcgccgggtgccaacgcc
ctcgaggttgccgaaggggtgcgtgccgagatggagcgtctcagtcagcgtttccctgcc
gatatggagcatgtgatcagctacgactccaccacctttatcgaggtgtctatggatgag
gtgttcgagaccctctatatcgccatcggcctggtagttgtcgtgaccttcctcttcctg
cagagctggcgcgcgaccctgatcccttcgatcgccattcccgtctcgctcatcggcacc
ttcgtggtgatggcggccatggggatagatatcaacaccatctccatgttcggcctgatc
ttggctatcggtgtggtggttgatgcggccatcgtggtgatagagaacgtcgaacgcctg
atgagcgaggagcatctcgacagcaaggcggcgacctccaaggcgatgaaagaggtgact
gccccccttatcgcctcggcattggtgctgctggcggtattcggtccagtctccttcgcc
ccaggcctggtgggccagatgtatcaacagtttggtgtgaccatctcggtatcgacagtg
atctcgaccgtggtcgccctcaccctgacaccagccctgtgcgccgcgctgatgcgccac
gaggcgcctaagacacgtggcccgctggcctggttcaaccaattcatcaacaggctgacc
aatggttatgtctcgtcggtaggcttcttcggtaagcgtcttatgctatcgggtgcgctg
ctggccctgctgatgggcgccatagtgctgctgggcgacaacatgcctaagggctttatc
ccagcggaagatcagggctcattcatggtggacatgaacctaccggaagcctcggcgctg
gacagaaccgacaagatggtcgatgagatgatcagcgaggtcagtgccctcgaaggggtc
aaacatgtggtggccgccaagggttatagcctgctcaagggcgcctcatcgtccaactct
ggcatgatgatcgtggtgctggacgactggagcgagcgccagacggcagaaacctcagag
tttgcgctggtggcccaggtacaggcgattatcgatcagaacaaagatgtcaccggcatg
gcgttttctatgccagccattcccggcctgggtaatgccggcggtctgaccctgcaggtt
gaagatctcagtggtcgcagcgtcgaacagatggcgcccgcgctggatggttatctggcg
gcgctcaacgatgccgacgagatcgccatggccttcaccacctatagtgccaatgtgcca
cagctctatctggatgtggacagagccaaggcgatggcgctgggggtcgatcttaacgag
gtcaacagcacgctgtctgccatgatgggcaatatgtatgtcaatgatttcactaagttt
ggtaagaactatcaggtgaacctgcaggcggagcaatcttaccgctcacaagagaaagac
ctggagcagatctatgtacgcgccctgtctggcgagatggtcaagctgtcgagctttgcg
tcctacaagccgctggtgggctcggacaacaccgcccgctacaacctgtacaacacggcg
caggtgattgccattccggccgacggttacagctcgggtgaggccatcgccgccatggag
cagattgccgacaccagcctgccacagggctacgcctacgagtggaccggcatgacctat
caggagctacaggcgggcgattcggcgcctatcctgttcgccctggcgctgctgttcacc
tacctcttcctggtggcgcagtacgagagctggatgatcccactggcgattatcctctgt
gtaccgacggcgctgtttggtgccctgggcttcaccgccctggcaggtggcagtatcaac
ctctacacccaggtgggcctggtactgcttatcggtatggcgagtcgcaacgcgattctg
attgtcgagtttgccaaggtgctgcgtgaagagaaggggctctccatcatggaggcggca
aagcaggcgattgccctgcgcctgcgagcggtattgatgacggccttctccttcatcctg
ggggtagtgcctctggttatagcctcgggggcgggctcagccagccgtaacgccctaggt
attgccagcttcggcggcatgttgattgccacagtgatcggctgtctgctggtgccaatc
tgtttcatcgcactgcaacgcctgcgtgagctaagacgctcacccgaggcgactgaagtg
acggcttaa
DBGET
integrated database retrieval system
