Streptomyces spectabilis: CP982_29295
Help
Entry
CP982_29295 CDS
T07323
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sspb
Streptomyces spectabilis
Pathway
sspb03030
DNA replication
sspb03410
Base excision repair
sspb03420
Nucleotide excision repair
sspb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP982_29295 (ligA)
03410 Base excision repair
CP982_29295 (ligA)
03420 Nucleotide excision repair
CP982_29295 (ligA)
03430 Mismatch repair
CP982_29295 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspb03032
]
CP982_29295 (ligA)
03400 DNA repair and recombination proteins [BR:
sspb03400
]
CP982_29295 (ligA)
Enzymes [BR:
sspb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CP982_29295 (ligA)
DNA replication proteins [BR:
sspb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CP982_29295 (ligA)
DNA repair and recombination proteins [BR:
sspb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CP982_29295 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP982_29295 (ligA)
MMR (mismatch excision repair)
DNA ligase
CP982_29295 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CP982_29295 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QEV62311
UniProt:
A0A5P2XCY1
LinkDB
All DBs
Position
6638630..6640813
Genome browser
AA seq
727 aa
AA seq
DB search
MAVEQEGAVPAEAREQHAQLAERIEEHRFRYYVKDQPVISDAEFDKLLRSLEALEERHPE
LRTPDSPTQKVASAYETDFASVEHRERMLSLDNAFDDEELAAWAERVTKEVGASAHHFLC
ELKIDGLAVNLTYEQGRLTRAATRGDGRTGEDITPNVRTIADIPDRLQGDRVPAFVEIRG
EVFFPMEKFQELNARLVEAGDKPFANPRNAAAGSLRQKDPRVTATRPLHMVVHGIGAREG
FDIDRLSQAYDLLRDWGLPTTTHSKVVQGLDGVREFITYYGENRHSVEHEIDGVVVKLDE
IPLQGRLGSTSRAPRWAIAWKYAPEEVNTKLIDIRVGVGRTGRVTPYAQVEPVTVAGSEV
EFATLHNQDVVKAKGVFIGDTVVIRKAGDVIPEILGPVVDLRDGSEREFVMPTECPECGT
ALRAMKEGDIDLRCPNGQTCPAQLRERLFYLAGRKCLDIENFGYVAAAALTRPLEPATPP
ILDEGDIFDLKVEELLPIKSYVLDQDSGLPKRDPKTGEEKVVTFFANLKGEPKKNTLAML
ENIQAAKERPLARILTGLSIRHVGPVAAEALAREFRSIDRIEQATEEELEATDGVGEIVA
KSVKEWFAEDWHQEIIRKWRAAGVRMEEEGGDEDEGPRPLEGLTVVVTGTLQKYTRDGAK
EALQSRGAKVTGSVSKKTGFVVVGDNPGSKYDKAMQVKVPVLDEDGFAVLLEQGADAARE
AALPTEE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtggctgtcgaacaggaaggcgcggtgccggccgaggcgcgcgagcagcatgcccagctg
gccgagcggatcgaggagcaccgcttccggtactacgtgaaggaccagccggtcatcagc
gacgccgagttcgacaagctcctgcgctcgctggaggccctggaggagcgccacccggag
ctgcgcacgccggactcgccgacccagaaggtcgccagtgcgtacgagacggacttcgcc
tcggtcgagcaccgcgagcgcatgctctccctcgacaacgccttcgacgacgaggagctg
gccgcctgggccgagcgcgtcaccaaggaggtcggcgcgagcgcgcaccacttcctgtgc
gagctcaagatcgacggcctcgcggtcaatctgacgtacgagcagggcaggctcacccgc
gccgccacccgcggcgacggccgcaccggcgaggacatcacgccgaacgtgcgcaccatc
gccgacatccccgaccgcctccagggcgaccgcgtcccggcgttcgtggagatccgcggc
gaggtcttcttccccatggagaagttccaggagctgaacgcccgcctggtcgaggcgggc
gacaagcccttcgccaacccgcgcaacgcggcggcgggttcgctgcgccagaaggacccc
cgcgtcaccgccacccgaccgctgcacatggtggtgcacggcatcggcgcccgcgagggc
ttcgacatcgaccgcctctcccaggcgtacgacctgctgcgcgactggggcctgcccacg
accacgcacagcaaggtcgtccaaggcctcgacggcgtccgcgagttcatcacgtactac
ggagagaaccgccactccgtggagcacgagatcgacggcgtcgtcgtcaagctcgacgag
atcccgctccagggccgcctcggctccacctcgcgcgccccgcgctgggccatcgcgtgg
aagtacgcgccggaggaggtcaacaccaagctgatcgacatcagagtcggtgtcggccgc
acgggccgcgtcacgccgtacgcccaggtcgagcccgtcaccgtcgcgggctccgaggtc
gagttcgccacgctgcacaaccaggacgtggtcaaggccaagggcgtcttcatcggcgac
acggtcgtgatccgcaaggcgggcgacgtcatcccggagatcctcggccccgtcgtcgac
ctgcgggacggcagcgagcgcgagttcgtgatgcccaccgagtgccccgagtgcggcacg
gccctgcgggccatgaaggagggcgacatcgacctccgctgcccgaacggccagacctgc
cccgcccagctgcgcgagcgcctgttctatctggcgggccgcaagtgcctggacatcgag
aacttcggctatgtggccgcggccgcgctcacccgccccctggagcccgccacgcccccg
atcctcgacgagggcgacatcttcgacctgaaggtcgaggagctgctgcccatcaagtcg
tacgtcctcgaccaggactcgggcctgcccaagcgggacccgaagaccggcgaggagaag
gtcgtgaccttcttcgccaacctcaagggcgagccgaagaagaacaccctcgccatgctg
gagaacatccaggccgccaaggagcgtccgctggcccggatcctcaccggcctgtccatc
cgccacgtgggcccggtggccgccgaggcgctcgcccgcgagttccgctccatcgaccgc
atcgagcaagccacggaggaggagctggaggccaccgacggcgtcggcgagatcgtcgcg
aagtccgtcaaggagtggttcgccgaggactggcaccaggagatcatccgcaagtggcgg
gccgcgggcgtccggatggaggaagagggcggtgacgaggacgaggggccgcgcccgctc
gaaggcctcaccgtcgtcgtcaccggaacgctccagaaatacacgcgggatggcgcgaaa
gaggcgctccagagccgcggagccaaagtcaccggttccgtttcaaagaagacgggattc
gtcgtggtgggggacaaccccggctcgaagtacgacaaggccatgcaagtgaaggttccc
gtactcgacgaggacggcttcgccgttctgctggaacaaggggcggacgccgcccgggaa
gccgcgcttccgaccgaagaatag
DBGET
integrated database retrieval system
