Sporomusa sphaeroides: SPSPH_023280
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Entry
SPSPH_023280 CDS
T10405
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ssph Sporomusa sphaeroides
Pathway
ssph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPSPH_023280 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssph03400
]
SPSPH_023280 (nth)
Enzymes [BR:
ssph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SPSPH_023280 (nth)
DNA repair and recombination proteins [BR:
ssph03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPSPH_023280 (nth)
Prokaryotic type
SPSPH_023280 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WXA39592
LinkDB
All DBs
Position
complement(2456180..2456815)
Genome browser
AA seq
211 aa
AA seq
DB search
MRITKAIKQEMLALLEQYYSDTTTALNYTTAFELLIAVVLSAQCTDTRVNIITARMFPRY
NTPEKILELGQDGLEAAIRDCGLFRSKAKNILATCEILCREYGGQVPEKFEDLLKLPGVG
RKTANVVISQLFGVPAIAVDTHVFRVANRLKLAMGDTPLAVEQGLMRAIPKEKWGDAHHW
LIWHGRKVCKAAKPLCRDCFLQHLCPSSNAK
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcataactaaagcaattaaacaagagatgcttgcattattggagcaatattatagc
gatactactactgcgctgaattacactacggcgtttgaacttttgattgccgtagtgtta
tcagctcagtgtacagataccagggtgaatattatcacggcgcggatgtttccccgttat
aatacaccggaaaaaattcttgagttggggcaggacgggcttgaagcagcaatcagggat
tgtggcttatttcgcagtaaagcgaaaaatattcttgcaacctgtgagatattgtgccgg
gaatatggcggacaagtgccggaaaaatttgaggatttactcaaactgcccggagtgggg
cggaaaaccgccaatgttgtgataagccaattatttggtgtgcctgccattgcagtggat
acccatgtattccgggtggctaaccggcttaagctggcaatgggtgatacgccgctggct
gttgagcaagggcttatgcgcgctattcccaaagaaaaatggggagatgcccaccactgg
ctcatctggcatggacgcaaagtctgcaaggcagcaaaaccgttgtgtagggattgcttt
ttgcagcatttgtgtccaagcagtaatgctaagtag
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