Sporomusa sphaeroides: SPSPH_029260
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Entry
SPSPH_029260 CDS
T10405
Symbol
patB_3
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
ssph Sporomusa sphaeroides
Pathway
ssph00270
Cysteine and methionine metabolism
ssph00450
Selenocompound metabolism
ssph01100
Metabolic pathways
ssph01110
Biosynthesis of secondary metabolites
ssph01230
Biosynthesis of amino acids
Module
ssph_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SPSPH_029260 (patB_3)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SPSPH_029260 (patB_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssph01007
]
SPSPH_029260 (patB_3)
Enzymes [BR:
ssph01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
SPSPH_029260 (patB_3)
Amino acid related enzymes [BR:
ssph01007
]
Aminotransferase (transaminase)
Class II
SPSPH_029260 (patB_3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WXA40148
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Position
complement(3109092..3110300)
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AA seq
402 aa
AA seq
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MGNSSAEFDFDQLIARRGTDSRKWDDIGSVFGSEEVLPLWIADMDFASPPAVAAKIRERA
GHSVYAYNTRDRAPFSQAIIDWVRRRHDWNIEKEWIVQAPGVVPAIILSILALSKPGDGI
IIQPPVYPPFFASIKDNHRNIVENPLISHNGYYEMDFADLEQKLANPDNKLLLLCSPHNP
VGRVWKREELTRVYNLCQAYQVDVLSDEIHSDLVYGGHKHTVFASLGTPVCHQSITFMAA
SKTFNIAGLNTSFIIVPCKQRRGLIETEINRMHLRRNNLFGVLATEAAYQAGEAWLDALL
VYLEKNAAMLVDFMEARLPGVKVVKPEGTFLAWLDFRAYFNEANELSKFLVEQAQVGLNP
GLAFGTQAAGFARLNFATRQSVVLEAVTRIEKAIKQLDRRGS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacagcagcgccgagtttgattttgatcagcttattgcccggcggggaaccgat
agccgcaaatgggatgatatcggcagtgtgttcggcagtgaagaggttttgccgctgtgg
attgcagatatggattttgcgtcgcccccggcggtcgcggcgaagattagagaacgtgcc
gggcattctgtttatgcgtacaacacccgtgaccgggcgccctttagccaggcaattatc
gactgggtaagacgtcggcatgattggaatattgaaaaagaatggattgttcaggccccc
ggtgttgttccggccatcattttatctattttagcgctttcaaaaccgggtgacggcatt
attattcagccaccggtatatcccccgttttttgcttccatcaaagataatcaccggaac
attgttgagaatccgttaatttcacataatggttactatgaaatggattttgctgatttg
gaacaaaaactggcaaatccggacaacaaattgctcttgctctgcagcccgcacaatccg
gtgggccgcgtgtggaaacgggaggaactgacaagagtatataatctttgtcaagcctat
caggtagatgtattgtctgatgaaattcacagcgatttggtatacggcgggcataaacat
accgtatttgcctcactgggcacaccggtgtgccaccagagcattacttttatggcagca
agtaaaacctttaatatcgccggactcaatacctcctttattattgttccctgcaagcag
agacgcggattaattgagacagaaattaaccgcatgcatctgcggcgcaataatcttttt
ggcgtgttggctaccgaagctgcttatcaggcaggcgaggcatggctggatgctttgctg
gtgtatttggagaaaaacgcggctatgcttgtggattttatggaagcaagactgcctggc
gttaaggtggttaaaccggagggaacatttttggcatggctggattttcgtgcatacttt
aacgaagcaaatgagttgagcaaatttctggtagaacaggcacaagtaggcttaaaccca
ggcctggctttcggcacgcaggcagcagggtttgcgcgccttaattttgctacccggcag
agtgttgtgctggaggccgtaacgagaattgaaaaagcaattaagcagctggacaggcgc
ggcagctaa
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