Sphingobacterium spiritivorum: I6J01_12230
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Entry
I6J01_12230 CDS
T07566
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi00300
Lysine biosynthesis
sspi00550
Peptidoglycan biosynthesis
sspi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I6J01_12230
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I6J01_12230
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sspi01011
]
I6J01_12230
Enzymes [BR:
sspi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
I6J01_12230
Peptidoglycan biosynthesis and degradation proteins [BR:
sspi01011
]
Precursor biosynthesis
Amino acid ligase
I6J01_12230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
QueT
DUF6305
Motif
Other DBs
NCBI-ProteinID:
QQT34111
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Position
2948636..2950090
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AA seq
484 aa
AA seq
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MIKLKDILHAIPVQEVVGQLDVEVTSLCFDSRQANEGSLFVAVRGVHTDGHLFVEKAIQQ
GCTLIMVEEMPAEKSEGVTYMMVADTAYALGIAAGNFYGNPSRELKLVGVTGTNGKTTIA
TLLFNLFTALGYHVGLLSTVQNQIGERIIPATHTTPDPVALNALLRDMVDEGCDYCFMEV
SSHAVVQQRIAGLRFAGGIFSNITHDHLDFHKTFDNYIKAKKKFFDDLDRFAFALTNGDE
KNGSVMLQNTFAHKKTYGLKGVADFKAKIIESHFDGMLLNIEGHEVWVKLVGEFNAYNIL
AVYGAAILLEQETVKVLTALSQITGAEGRFEAITSKNGVIGIVDYAHTPDAVANVLSTIN
NLRKKEQQIITVLGCGGDRDKTKRPEMAEVAAKMSDKVIITSDNPRTEDPVQIIKDMEPG
IPADRKKNVFSITDRKEAIRAACHLAQPGDIVLVAGKGHEKYQDINGVKHHFDDREELEK
TFNE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgataaaactaaaagacatattgcatgctattccggtacaggaagtggtgggtcagctg
gatgttgaggtgacttcattatgttttgattcccgtcaggcgaatgagggtagtcttttt
gttgctgtgcgtggcgtgcatacagacggacacctgtttgtagaaaaagccattcagcaa
ggatgtacgctcattatggtggaagagatgccagcggaaaagagcgaaggtgttacctat
atgatggttgccgataccgcctatgcattgggtattgctgccggtaatttctacggaaat
ccttcccgcgaattgaagctggttggggtgacaggtacaaatggtaagaccacgattgca
acattgctattcaatctgtttacagctcttggatatcatgtaggtttgctttctaccgtt
cagaatcagatcggagagcggattatacctgccacacatacgactccggatccggtagca
ttgaatgcattgctgcgggatatggtagatgaaggctgtgactactgttttatggaagtc
agctcgcatgctgtcgtacagcagcgcattgcaggacttcggtttgccggaggtattttc
agcaatatcacacacgatcatctggattttcacaagacatttgataattacataaaagcg
aaaaagaaattttttgatgatctggatcgctttgcatttgcattgaccaatggagatgaa
aagaatggttctgtaatgttgcagaatacgtttgcacataagaaaacatacgggttaaaa
ggcgtggctgattttaaagccaaaatcattgaaagccattttgatggtatgctgctcaat
atagaaggccatgaagtatgggttaagttagttggagagttcaatgcttataatatactg
gcggtatatggagctgcaatcttactggagcaggagacggtcaaagtcctgactgcgctc
agtcagatcacaggtgctgaaggacgctttgaagccatcacatcaaaaaacggagtgatt
ggtattgtggattatgcacacacaccggatgctgttgcaaatgtgctgagcaccattaac
aatctacgtaaaaaagaacagcagattatcacagtattgggctgcggaggcgatcgggat
aaaaccaaacgtccggaaatggctgaagttgctgccaaaatgagtgataaagtgattata
acttcagataatccgcgcacagaagatccggtacagattatcaaagatatggaacccggt
attcctgctgacagaaagaaaaatgtattctcgatcacagatcgtaaagaagctattcgt
gcggcatgtcatcttgctcagcccggcgatattgttcttgttgcaggtaaagggcatgaa
aaatatcaggacatcaacggtgtgaaacatcattttgatgatcgtgaagaattggaaaaa
acgtttaatgaataa
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