Sphingobacterium spiritivorum: I6J01_15020
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Entry
I6J01_15020 CDS
T07566
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi01501
beta-Lactam resistance
sspi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6J01_15020
01503 Cationic antimicrobial peptide (CAMP) resistance
I6J01_15020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sspi02000
]
I6J01_15020
01504 Antimicrobial resistance genes [BR:
sspi01504
]
I6J01_15020
Transporters [BR:
sspi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
I6J01_15020
Antimicrobial resistance genes [BR:
sspi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
I6J01_15020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
QQT34602
LinkDB
All DBs
Position
complement(3572698..3575868)
Genome browser
AA seq
1056 aa
AA seq
DB search
MISEVFIKRPITAIVISILITILGTISVATLPISQYPSIAPPTVSVTANYTGADAQTVEQ
TVTTPIESQINGTPGMIYMSSNSTSNGQSQITVTFEVGTDIDIATLDVQNRVGIAEPSLP
EAVRRLGVTTRKANTDILMLVSLVSPKGTRDDKFLSNYINLYIKDAIMRVKGVGDATVFG
QPFSMRVWLDANKLSNLGLTPADVSNAIQEQNIRMPGGSVGGRPQESSTVFEYPILTDGD
LSNVEDFEDIIVKANTDGSIVLLKDVARVELGQFSYSTSTKTDGMVSTGMMINQTPGGNA
VETADGIYKALEQLKKSFPDDVDYVVGYETISVVNASIESVIHTLLEALLLVTVVVFFFL
QSWRATLIPVLAIPVSIVGTFIFFLLFGFSINNLTMLAFVLAIGIVVDDAIVVVEAVQHY
IDHYKLDAKEATRRAMKDITAPVIAIALILSAVFVPVGFIPGMVGKLYQQFAITIAVSVM
LSAFIALTLTPALCSLMLRPTSVNKEARGLNKFFYKFNVWFEKVTNKYSKGVQQCIRKAP
LVLIILLCIFVGTGWMFNAKPTGFIPSEDGGMFFAGVTLPEGASSARTNEVLDELEADLK
KDFPEINHVTTISGINILNRAFKPNGATLFVSLKHWNDRKRTAAEITGAIMQKYMAYQKA
RILAVTPPAIPGLGTSGGFSMMLLDQQTVDIKEFEGVVGKFLAAANQRPEIGMAYTLFSS
NSPNYKLHVNREQAKRMGVPVSNIYSTIAAYLGSSYVNDFTKYGRNFRVVTQADTAYRMG
IEDINKLYVRNAAGSSVPMATLVSYELTTSPSIVNHYNIFRSIEVSGSAAPGYSSGDALK
ALEEVAAQTLPNGYDYQFSGLSLQEKQSGSQTIMIFALCILFVFLLLASLYESWSVPFSI
LLSVPLGVFGAILTLILIPRLDNNIFAQIGLVTIIGLAAKNAILIVEFAKERVDIGMNLI
DATLDAVKLRLRPIIMTSLAFILGIIPLMLSTGAGAVSRQTIGWTVFGGMTAATFLAIFI
VPVLFVAITRMAYGKKKLAELEANFDEEKAKNLSAH
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagaagtttttataaaaagacccataacggcaatcgtaatatcaatattgatt
acgattctgggaacgatatccgttgccacactgccgataagtcaatacccttccattgct
cctccgacagtatctgtgacggctaactatacaggtgccgatgcacagactgtagaacaa
acggtgactactcctattgagagtcagatcaacggtactccgggcatgatctatatgtca
tcaaacagtacctcaaacggtcagtctcagatcaccgtaacctttgaagtaggtacagat
attgatattgcaacgcttgacgttcaaaaccgtgtgggtattgctgaaccgtcactaccg
gaagcggtaagacgtctgggtgtgactacacgtaaagcaaatacagatatcctgatgctc
gtttccttagtttctcctaaaggaacaagagatgataagtttctgtccaactatatcaac
ctctacatcaaagatgcgattatgcgtgtcaaaggtgtgggtgatgcaacagtattcgga
cagccattctctatgcgggtatggttagatgcaaacaaactgtcaaaccttggacttaca
cctgctgatgtatcaaatgctatccaggaacagaatatacggatgccgggaggtagtgtg
ggtggacgccctcaggaatcttctactgtattcgaatatcctatcctgacagatggagat
ctttccaatgtggaagactttgaagatattattgtaaaagccaatacagacggatctatc
gtattattgaaagatgtggcccgtgtagagcttggacaattctcttacagtacctctacc
aaaactgacggaatggtatctaccggtatgatgatcaatcagactccgggaggtaatgcg
gtagaaacagctgatggtatttacaaagcattggaacagttgaaaaaatcatttccggat
gatgtggattacgttgtcggatatgaaaccatttcggttgtaaatgcatctatagaatcg
gttatccacacccttttagaagccttattactggtaacggtggtggtgttcttcttcctg
cagagctggcgagcaacattgatccctgtactggctatcccggtttctattgtaggaaca
tttatattcttcttactgtttgggttctctatcaataacctgacgatgcttgcattcgta
ctcgcaattggtatcgtagtggatgatgccatcgttgtagtggaagctgtccagcattat
atagatcattataagctggatgctaaagaagctacccgtagggcgatgaaagatattacg
gctcctgttattgcaattgcactgattctttctgcagtattcgttccggtaggatttatc
ccgggtatggttggtaaactttaccagcagtttgccattacaattgccgtatctgtaatg
ttatcggcttttatagcacttacccttactccagccctgtgttcactgatgttgagacca
acatccgttaataaagaagcccgaggactgaataagtttttctacaaattcaatgtatgg
tttgaaaaagtaactaacaaatattccaaaggtgtacagcaatgtatccgtaaggcacct
ctggtactgattatcctcttatgtatttttgtgggaacaggatggatgttcaacgccaaa
cctacaggatttattccttccgaggatggaggtatgttctttgccggtgttacattgcct
gaaggagcttcttctgcccgtacaaatgaggtactggacgaactggaagcggacttaaag
aaagatttccctgaaatcaatcacgtaacgaccatttctggtatcaatatccttaaccgt
gcatttaaaccaaatggtgcaacgctctttgtttcattgaaacactggaacgaccgtaag
cgtacagctgcggagattacaggtgctattatgcaaaaatatatggcttatcaaaaagcc
cgtattctggcagtaacacctcctgctattccgggtcttggtacatccggaggtttctct
atgatgttattagatcagcagacggtagatatcaaagaatttgaaggcgtagtaggtaaa
ttcttggccgctgctaatcagcgtcctgagatcggtatggcctataccctgttcagttcg
aattctcctaactataaactgcacgtaaatcgtgaacaggcaaaaagaatgggagttcct
gtttccaatatctattcgactatagctgcgtaccttggtagtagttatgtcaacgatttc
acgaaatatggccgtaacttccgtgtcgttacacaggcagatacagcttatcgcatggga
atagaagatatcaacaaactgtatgttagaaatgcagccggctcttcggtaccaatggct
acattggtcagttatgaactgacaaccagtccatccatcgtcaatcactacaatatcttc
agaagtattgaggtatcgggtagtgctgctccggggtatagctcgggagatgcattaaaa
gcattggaggaagtcgctgcacagacattgcctaacggttatgactatcagttctcgggt
ctgagtttgcaggaaaaacaatcgggatcacaaacgatcatgatctttgcactctgtata
ctcttcgtattcttgcttctggcatccttatacgaaagctggtcagtaccattctcgatt
ctcctttctgtacctctgggggtattcggagcaatcctgacattgattctgattccgaga
ctggataacaatatctttgctcagattggtctcgtcacgattatcggtcttgcagcgaaa
aatgccattctgatcgtggagtttgctaaagagcgtgtagatatcggtatgaatctgatc
gacgcaacattagatgcagtcaaactacgtttacgccctatcattatgacatcgcttgca
tttattctgggtattatcccgctgatgctttctactggtgccggtgctgtatcacgtcag
acaattggatggacagtattcggaggtatgacagctgcaacatttttagcgatttttatt
gtccctgtcttgtttgttgccattacacgtatggcatatggaaagaaaaaattagccgaa
cttgaagctaattttgatgaagagaaagctaaaaatctaagtgcccattaa
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