KEGG   Salvia splendens (scarlet sage): 121741844
Entry
121741844         CDS       T07627                                 
Name
(RefSeq) DNA repair protein RAD16-like
  KO
K15083  DNA repair protein RAD16
Organism
sspl  Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121741844
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      121741844
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-C3HC4_2 zf-C3HC4_3 zf-C3HC4 DEAD zf-RING_5 zf-RING_2 Prok-RING_4 ResIII zf-RING_UBOX zf-rbx1 zf-RING_Vps41 zf-RING_4
Other DBs
NCBI-GeneID: 121741844
NCBI-ProteinID: XP_041990707
LinkDB
Position
7:complement(36416647..36424589)
AA seq 897 aa
MRLRSHGDGASSSNGKRKLKYRDGSDAEDYGVEPSSDSDFDVPSDDGEDLLDALDNSAAM
FNLNYISEDDGVTKRRKKNSYGKSASSKKVDEEESERCSDADIETGIGIDLGKIEYASGI
AEKFLTKRKGKKKKDRPILMWEVLEEENDRWIEENLQMDMDLMNQNEISMETAEPSEDLI
IPLLRYQKEWLAWALKQEESSARGGILADEMGMGKTLQAIALVLFKRSISAGISDAYLPS
SSGSSSKELPQIKGTLVICPLVAVMQWVREIDRFTAKGSTKVLVYHGANRAKNLYQLSDY
DFVITTYAIVEAEYRKYVMPPKDKCQYCGKLFYEHKLKIHLKYMCGPGAVRTAKQAKQQR
KDPKGKKMPDLEVNTREINKGNKNGIGCKEMENDDSVDNSDMTSLTTSKGKSILHCAAWE
RIVLDEAHCIKERRSNTTRAVLALQSRYKWALSGTPLQNRVGELYSLIRFLQIVPYSYYF
CKDCDCRTLDYSTAECPGCEHKNVRHFCWWNRYVSTPIQDSGRKGGGRGAMILLKHKILK
SLVLRRTKKGRAADLALPPRIVTLRRDSLDVVEEDYYTALYNESQAQFNTYVDAGTLMNN
YAHIFDLLTRLRQAVDHPYLVEYSLTSMERKGKAVDTGSDVKCGLCNDTEEDTVVTSCGH
TFCKPCLIDFSASMGQNSCPTCSKPLTVDFTANKAGKEPRSKTTVKGFRPSSILNRIRLD
DFQTSTKIDALREEIRFMVERDGSAKAIVFSQFSSFLDLIHYALQKSGVQCVQLDGSMSM
GARDTAIKKFTEDPSCRVFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRI
GQFKPIRIVRFIIENTVEERILKLQEKKELVFEGTVGGCSEALAKLTEADLRFLFVT
NT seq 2694 nt   +upstreamnt  +downstreamnt
atgaggcttcgctctcacggcgatggcgcttcttcttccaacgggaagcggaaactcaag
tacagagacggttctgatgcggaagattatggagtggagccctcctccgattctgatttt
gacgttccgagtgatgatggtgaagatctgcttgatgcacttgataacagtgcagcaatg
ttcaatttgaactatataagtgaagatgatggtgtcacgaagaggaggaaaaagaactcc
tatgggaaaagcgcaagtagtaaaaaagttgatgaagaagagagtgagagatgctcagat
gcagacattgagactggtattggcattgatctagggaaaatcgaatacgctagtggaata
gctgagaaatttctcacgaaaaggaagggaaagaagaaaaaagataggcctatattaatg
tgggaagtattagaagaagaaaatgatagatggattgaagagaatttacaaatggatatg
gacctgatgaatcagaatgagatatcaatggaaactgctgagccttcagaggacttgata
ataccactactaagataccagaaggagtggttagcatgggctttgaagcaagaggaatct
tctgcccgaggtggcatccttgccgatgagatggggatgggcaagactctccaggcaata
gcgctcgttctttttaaaagaagcatctcagcaggaatttctgatgcttacttaccctca
tcttcaggcagttcctcaaaggagttgccacaaataaagggcacacttgttatatgtccc
ctggttgctgtgatgcagtgggttagagagattgatcgattcactgccaaaggaagcacc
aaagtcctcgtctatcatggtgccaaccgagcaaaaaatctttatcagctgtcagattat
gattttgttataacaacatatgcaattgttgaggcagaatacagaaaatatgtgatgcct
cctaaagacaaatgccagtattgtggaaaattgttttatgagcataagttgaaaattcac
ttgaaatatatgtgcggacctggtgctgttcggactgctaagcaggcaaagcagcaaaga
aaggatccaaagggcaagaaaatgccggatcttgaggttaatacaagggagataaacaaa
gggaacaaaaatggcattggttgcaaggaaatggaaaatgatgattcagttgataattca
gatatgactagcctaaccacatccaagggaaaatctattctgcactgtgcggcttgggaa
cgtattgtattggatgaggctcattgtattaaagaaagacgtagcaatacaactagagct
gttcttgctctacaatctagatacaaatgggctttaagtggtactccccttcagaatcgt
gtgggcgagctctactcacttattcgctttctccagatagttccttactcgtattatttt
tgcaaggattgcgattgtcgtacgcttgattacagtacagcagaatgcccaggatgtgag
cataaaaatgttcggcacttctgctggtggaatagatatgtttctacaccaattcaagat
tctggcaggaagggaggtggtagaggtgctatgattttgttaaagcacaaaatcctgaaa
agcttagtgttaaggcgtacaaaaaagggtagagcagctgaccttgcgctaccccctaga
attgttacattgagaagagattctctcgatgttgttgaagaagactattatacagcactc
tacaacgagagtcaagcacagtttaatacatatgttgatgcaggaacactgatgaataac
tatgcccacatatttgatctactgacacgccttcgtcaggcagttgatcatccctacctc
gtggaatattctcttacttcaatggaaagaaagggcaaagcagttgatactggaagtgat
gtaaaatgtggcttgtgtaatgacaccgaagaagacacagtggtcacatcatgtgggcat
accttctgcaaaccttgtttgatcgattttagtgctagcatgggacaaaactcttgccct
acttgttcaaagccacttactgttgatttcaccgccaacaaagctgggaaagaaccaagg
tcaaaaacaaccgtcaaaggattcagaccatcaagtattttgaatagaatccggcttgat
gattttcagacaagtacaaaaattgatgctttgagggaagaaattcgatttatggttgaa
agggatggttctgccaaggcaattgtcttcagccagttctcgtctttcttggatctcata
cactatgcccttcagaagtctggagtgcagtgtgtccagttagatgggtccatgtcaatg
ggagctagagatactgctataaaaaagtttaccgaggatcctagttgcagagtctttctg
atgagcttaaaagcagggggtgtcgcccttaatctcacggtagcatcacatgttttcttg
atggatccatggtggaatcctgctgtggagcggcaggcgcaagacagaattcaccgaata
ggccaattcaaaccgatacggattgtgaggtttattattgaaaacaccgtggaggaaagg
attttaaagttgcaggagaagaaggaattagtattcgagggcacggtgggtggatgttcg
gaggcactggccaaattaacagaagctgatctgagattcctgtttgtgacctga

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