Salvia splendens (scarlet sage): 121741844
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Entry
121741844 CDS
T07627
Name
(RefSeq) DNA repair protein RAD16-like
KO
K15083
DNA repair protein RAD16
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121741844
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
121741844
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
DEAD
zf-RING_5
zf-RING_2
Prok-RING_4
ResIII
zf-RING_UBOX
zf-rbx1
zf-RING_Vps41
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
121741844
NCBI-ProteinID:
XP_041990707
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Position
7:complement(36416647..36424589)
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AA seq
897 aa
AA seq
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MRLRSHGDGASSSNGKRKLKYRDGSDAEDYGVEPSSDSDFDVPSDDGEDLLDALDNSAAM
FNLNYISEDDGVTKRRKKNSYGKSASSKKVDEEESERCSDADIETGIGIDLGKIEYASGI
AEKFLTKRKGKKKKDRPILMWEVLEEENDRWIEENLQMDMDLMNQNEISMETAEPSEDLI
IPLLRYQKEWLAWALKQEESSARGGILADEMGMGKTLQAIALVLFKRSISAGISDAYLPS
SSGSSSKELPQIKGTLVICPLVAVMQWVREIDRFTAKGSTKVLVYHGANRAKNLYQLSDY
DFVITTYAIVEAEYRKYVMPPKDKCQYCGKLFYEHKLKIHLKYMCGPGAVRTAKQAKQQR
KDPKGKKMPDLEVNTREINKGNKNGIGCKEMENDDSVDNSDMTSLTTSKGKSILHCAAWE
RIVLDEAHCIKERRSNTTRAVLALQSRYKWALSGTPLQNRVGELYSLIRFLQIVPYSYYF
CKDCDCRTLDYSTAECPGCEHKNVRHFCWWNRYVSTPIQDSGRKGGGRGAMILLKHKILK
SLVLRRTKKGRAADLALPPRIVTLRRDSLDVVEEDYYTALYNESQAQFNTYVDAGTLMNN
YAHIFDLLTRLRQAVDHPYLVEYSLTSMERKGKAVDTGSDVKCGLCNDTEEDTVVTSCGH
TFCKPCLIDFSASMGQNSCPTCSKPLTVDFTANKAGKEPRSKTTVKGFRPSSILNRIRLD
DFQTSTKIDALREEIRFMVERDGSAKAIVFSQFSSFLDLIHYALQKSGVQCVQLDGSMSM
GARDTAIKKFTEDPSCRVFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRI
GQFKPIRIVRFIIENTVEERILKLQEKKELVFEGTVGGCSEALAKLTEADLRFLFVT
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttcgctctcacggcgatggcgcttcttcttccaacgggaagcggaaactcaag
tacagagacggttctgatgcggaagattatggagtggagccctcctccgattctgatttt
gacgttccgagtgatgatggtgaagatctgcttgatgcacttgataacagtgcagcaatg
ttcaatttgaactatataagtgaagatgatggtgtcacgaagaggaggaaaaagaactcc
tatgggaaaagcgcaagtagtaaaaaagttgatgaagaagagagtgagagatgctcagat
gcagacattgagactggtattggcattgatctagggaaaatcgaatacgctagtggaata
gctgagaaatttctcacgaaaaggaagggaaagaagaaaaaagataggcctatattaatg
tgggaagtattagaagaagaaaatgatagatggattgaagagaatttacaaatggatatg
gacctgatgaatcagaatgagatatcaatggaaactgctgagccttcagaggacttgata
ataccactactaagataccagaaggagtggttagcatgggctttgaagcaagaggaatct
tctgcccgaggtggcatccttgccgatgagatggggatgggcaagactctccaggcaata
gcgctcgttctttttaaaagaagcatctcagcaggaatttctgatgcttacttaccctca
tcttcaggcagttcctcaaaggagttgccacaaataaagggcacacttgttatatgtccc
ctggttgctgtgatgcagtgggttagagagattgatcgattcactgccaaaggaagcacc
aaagtcctcgtctatcatggtgccaaccgagcaaaaaatctttatcagctgtcagattat
gattttgttataacaacatatgcaattgttgaggcagaatacagaaaatatgtgatgcct
cctaaagacaaatgccagtattgtggaaaattgttttatgagcataagttgaaaattcac
ttgaaatatatgtgcggacctggtgctgttcggactgctaagcaggcaaagcagcaaaga
aaggatccaaagggcaagaaaatgccggatcttgaggttaatacaagggagataaacaaa
gggaacaaaaatggcattggttgcaaggaaatggaaaatgatgattcagttgataattca
gatatgactagcctaaccacatccaagggaaaatctattctgcactgtgcggcttgggaa
cgtattgtattggatgaggctcattgtattaaagaaagacgtagcaatacaactagagct
gttcttgctctacaatctagatacaaatgggctttaagtggtactccccttcagaatcgt
gtgggcgagctctactcacttattcgctttctccagatagttccttactcgtattatttt
tgcaaggattgcgattgtcgtacgcttgattacagtacagcagaatgcccaggatgtgag
cataaaaatgttcggcacttctgctggtggaatagatatgtttctacaccaattcaagat
tctggcaggaagggaggtggtagaggtgctatgattttgttaaagcacaaaatcctgaaa
agcttagtgttaaggcgtacaaaaaagggtagagcagctgaccttgcgctaccccctaga
attgttacattgagaagagattctctcgatgttgttgaagaagactattatacagcactc
tacaacgagagtcaagcacagtttaatacatatgttgatgcaggaacactgatgaataac
tatgcccacatatttgatctactgacacgccttcgtcaggcagttgatcatccctacctc
gtggaatattctcttacttcaatggaaagaaagggcaaagcagttgatactggaagtgat
gtaaaatgtggcttgtgtaatgacaccgaagaagacacagtggtcacatcatgtgggcat
accttctgcaaaccttgtttgatcgattttagtgctagcatgggacaaaactcttgccct
acttgttcaaagccacttactgttgatttcaccgccaacaaagctgggaaagaaccaagg
tcaaaaacaaccgtcaaaggattcagaccatcaagtattttgaatagaatccggcttgat
gattttcagacaagtacaaaaattgatgctttgagggaagaaattcgatttatggttgaa
agggatggttctgccaaggcaattgtcttcagccagttctcgtctttcttggatctcata
cactatgcccttcagaagtctggagtgcagtgtgtccagttagatgggtccatgtcaatg
ggagctagagatactgctataaaaaagtttaccgaggatcctagttgcagagtctttctg
atgagcttaaaagcagggggtgtcgcccttaatctcacggtagcatcacatgttttcttg
atggatccatggtggaatcctgctgtggagcggcaggcgcaagacagaattcaccgaata
ggccaattcaaaccgatacggattgtgaggtttattattgaaaacaccgtggaggaaagg
attttaaagttgcaggagaagaaggaattagtattcgagggcacggtgggtggatgttcg
gaggcactggccaaattaacagaagctgatctgagattcctgtttgtgacctga
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