Salvia splendens (scarlet sage): 121742556
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Entry
121742556 CDS
T07627
Name
(RefSeq) E3 ubiquitin-protein ligase RZFP34-like
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121742556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121742556
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121742556
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121742556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
121742556
NCBI-ProteinID:
XP_041991656
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All DBs
Position
7:2426663..2429014
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AA seq
283 aa
AA seq
DB search
MCDFEEESAVALLDDLNEDGAIQLDFSSAKYGCKHYKRRCKIRAPCCDEVFDCRHCHNEA
KNDLEINPINRHDIPRHEVKKVICSICDTEQNVQQNCTNCGVCMGNYFCDKCKFFDDDVA
KKQYHCDDCGICRTGGAENFVHCTKCGCCYASSIKDTHRCVERAMHHNCAVCFEYLFDST
KNITVLPCGHTIHFECVREMKLHHRYSCPVCSKSIGDMSNAWRKLDEEIASTPMPEMYKD
KKVWILCNDCEGISEVQYHIFANKCSRCKSYNTRQIQGVPASC
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgattttgaggaagaatcggccgtcgctttgttggatgatctcaatgaagatggg
gcgattcaattggatttttcctctgccaaatatgggtgcaagcattacaaaaggagatgc
aaaattagggctccttgttgtgatgaggtttttgattgcaggcattgtcacaatgaagct
aagaatgatctcgaaatcaatccgattaatcgacacgacattccccgccacgaagtgaag
aaggttatatgttcgatttgtgacaccgaacaaaatgttcaacaaaattgcacaaattgt
ggagtttgcatggggaattatttctgtgacaaatgcaaattctttgatgatgatgtggcg
aagaaacaataccactgtgatgattgtggaatatgcagaactggaggggcggagaatttc
gtccattgcacaaaatgtgggtgctgctacgcgtcatccattaaggacacacatcgttgt
gtagagagagcgatgcatcataattgcgcagtttgctttgagtacttattcgattcaacc
aagaacatcactgttctaccatgtggacacaccatacatttcgaatgtgttcgcgaaatg
aagcttcatcacagatattcatgcccggtctgctctaaatccatcggcgacatgtcaaac
gcatggaggaagcttgatgaagagattgcttcgactccaatgccggagatgtacaaagac
aaaaaggtttggatactatgtaatgattgtgagggaatatctgaggtgcaataccacata
tttgcaaacaaatgctcacgctgcaaatcatacaatacccggcaaattcaaggcgttccc
gcctcctgttga
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