Salvia splendens (scarlet sage): 121743530
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Entry
121743530 CDS
T07627
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
sspl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121743530
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
121743530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121743530
Transcription factors [BR:
sspl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121743530
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
121743530
NCBI-ProteinID:
XP_041992787
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All DBs
Position
8:10101336..10104191
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AA seq
505 aa
AA seq
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MPLYEFLRLAIEKLESSQQKSSSVDPSSKTENGLFGQPDKVATNLSLQPDTPSACDGERP
GKSSGVEYIFNDISPVLDISRKDEASPWLSYPGDDSLQVYSSGVLPQQSSVSFMSQKHGR
SCDQGVSDSDVVELSSFKARPLQTCLHQKDHTSDPSLLNCQDAKFWNSEEGVDLHVPAAV
NSSRLLANEDKDLFHDGRTKDISLDTFLKTDKSLIQNNTVASTRPLDGERIVESIVGSSF
VSSGNSADKNLDEQNHYTKRKSRENEESSQSDELQTESVGLKTLTPAEGGRGSKRRRVAE
MHNLSERRRRDRINQKMLALQELIPNCNKTDKASMLDEAIEYLKILKHQVQIMSMGYGVC
VAPLMFPPGAQNMYYAHTPHPSYAGMRMGASFGNTNGDSVHCPVFHPHFPTPIVNCQGAI
APMHGHPCPRLHTTVSGAHTHLFPPTKSNKTTVMGASALKLTDQNSKDLIANKKSHNVEV
SSSVSTNLQAENEVRNNRAADGTRN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtatgagttcttgagattggctatcgaaaagcttgaatctagccagcagaaa
tcatcttctgttgatccctcttcaaaaacggaaaatggcttatttgggcagcctgataag
gttgctaccaatctcagtttgcagcctgatacccctagtgcctgtgatggagagaggccg
ggaaaatctagtggtgtcgagtatatcttcaatgatatttcgccagtattggatataagt
cgaaaggatgaagcctctccttggttaagttatcccggagatgatagcctgcaagtttac
tcttctggtgtcttacctcaacaatcaagtgtttcttttatgtcacagaaacatggaagg
agttgtgatcagggagttagtgattcggacgttgtggagttatcttctttcaaagctcgt
ccgctgcaaacatgtctgcatcagaaggaccatacatcagatccttccttactcaattgc
caagatgctaagttttggaatagtgaagagggtgtagacttacatgttccagctgcagta
aactcttcacggttattggccaacgaagataaagatttgtttcatgatggaaggaccaag
gatatcagcctagatacattcttgaaaactgacaaaagtttgatacaaaacaacactgtt
gcttcaactaggcctctagatggggagaggattgtcgagtctatcgttggttcttcgttt
gtaagctctggtaacagtgctgataagaatctcgatgaacagaaccattataccaaaaga
aaatctcgtgagaatgaggagtctagccaaagtgatgaacttcaaaccgagtctgttggt
ctgaaaacactaactccagctgaaggaggccggggatcaaagagaaggcgtgtggcagaa
atgcacaatctttccgaaaggaggcgaagagataggatcaaccagaaaatgcttgcttta
caagaactaatacccaactgcaataagacggataaggcttccatgctcgatgaagccatc
gagtatctaaagatccttaaacatcaagtgcagattatgtcaatgggatatggagtatgc
gtcgcgccattgatgtttccaccgggagcccaaaacatgtattacgcgcatacgcctcat
ccttcatacgcagggatgagaatgggagcgagttttggtaacacgaatggggattccgtt
cactgtcctgttttccatccacattttcctacgcctatcgtaaactgccaaggtgctatc
gctccgatgcatggacatccctgcccgagacttcacaccacagtctctggagcacacaca
cacttatttcctccaactaaatctaacaaaacaacagtgatgggggcaagtgccttgaag
ctcacagatcaaaactccaaggatctgattgcgaacaagaagtcacacaacgtggaagtg
agcagctcagtctctactaatctgcaagcggaaaatgaagttcgaaacaatcgagctgca
gatggcaccagaaactaa
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