Salvia splendens (scarlet sage): 121744792
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Entry
121744792 CDS
T07627
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor 4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121744792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121744792
Transcription factors [BR:
sspl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121744792
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
121744792
NCBI-ProteinID:
XP_041994371
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Position
8:34342047..34347021
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AA seq
423 aa
AA seq
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MDSCLPDWNTDVGGEFPVPLQRKPLGLQNELVELLWQNGEIVLHSQTNRKQSKQATLIQG
DDDDETVSWIDCPIDESFEREFCANFLSEIPPSLDESSKKQDGEREFKFGESSEVIHQGF
APPLPPPPPRFEEGVAGKSVECSGMTVGSSHCASNQVVNEVDMSWASSRGAGRGNYEGVE
REVPGQARTSCSGGSGSGSLWKTSSMSNETNRHKRKSRDMEESECPSDATESESAAGNKA
KNGAARRSRVAEVHNMSERRRRDRINEKMKALQELIPHANKSDKASMLDEAIEYMKALQL
QIQLMWMGRGMAPMMLPGMQQYMSRVGMGVGPTMLPEIHNLMRLPPMDQAMSGPIQARVG
PHNPLLNPVNYPNQMPSSSFQEQYANFMNFHSMQSAPPQSMNMFNFAFRPTQQNQGNGNT
SVG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggatagttgtcttcctgattggaacactgatgttggaggtgaatttcctgtccctctt
caaagaaaaccccttggattacagaatgagttggttgaactattgtggcaaaatggggag
attgtgttgcatagtcaaaccaataggaaacaatcaaagcaagctactttgattcaaggt
gatgatgatgatgagacagtttcatggattgattgccctattgatgaatcatttgagagg
gagttctgtgctaatttcttgtctgagatccctccatccttggatgaatcgagcaagaag
caggatggcgaaagggagttcaaatttggcgaatcatctgaggttattcaccaaggattt
gccccgcctctgcctccacctccacctagatttgaggagggtgtggccgggaagagcgtt
gagtgctctggcatgactgtcgggtcgagccattgtgcgagcaaccaagttgtgaatgaa
gtggacatgagttgggcttcaagccgtggggctgggaggggaaattacgagggcgtggag
agggaggtgcccgggcaggctaggacgtcttgctctggtggatccggtagtggtagtttg
tggaaaacgagtagcatgtcgaatgaaacaaacaggcacaagaggaagagccgtgacatg
gaggagtctgaatgtccgagtgatgcgactgaatcggagtcggctgcagggaacaaagca
aagaacggggctgcccgaaggagccgtgtagctgaagtgcataacatgtctgagagaagg
cgaagggaccggatcaacgagaagatgaaggcgttgcaggagctcatccctcatgccaac
aagtctgacaaggcgtccatgttagacgaggcgatcgagtacatgaaagccttgcagctg
cagattcagttgatgtggatggggagggggatggcgccgatgatgcttccaggcatgcag
caatacatgtcgcgtgtagggatgggtgtcgggccaaccatgctgcccgagatccataac
ctaatgcgcttgccgcccatggatcaagctatgagtgggccgatccaagctcgggtcggc
cctcataacccgttgttgaacccggttaattatccgaaccagatgccaagctcgagtttc
caagagcaatatgctaactttatgaactttcactcgatgcaaagtgctccgcctcagtcg
atgaacatgttcaacttcgcatttcgtccgacccagcaaaatcaaggcaacgggaacacg
tccgttggatga
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