Salvia splendens (scarlet sage): 121755794
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Entry
121755794 CDS
T07627
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like isoform X1
KO
K16189
phytochrome-interacting factor 4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121755794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121755794
Transcription factors [BR:
sspl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121755794
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
MBA1
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
121755794
NCBI-ProteinID:
XP_042007116
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Position
11:347854..350694
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AA seq
393 aa
AA seq
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MLTPMTLLPSCCYFPLQHLWQNFKVWILVFLIGTLMLEVNSLSLFKENLGLENELVELLW
QNGEIVLHSQTNRKQSKQSHGDGTVSWIDCPIDEPFEREFCANFLSEIPPSEGFAPPPPP
RFEAAEVPGKSLECSGMTVGSSHCASNQVVNKVDMSWASSSGVGKALNEGVEREAPGQAR
TSASGGSGSSSLWKTSSLSNETSRHKRKSRDMEESECPSDATESESAAGNKAKNGAARRS
LVAEVHNMSERRRRDRINEKMKALQELIPHANNSDKASMLDEAIEYMKALQMQIQLMWMG
RGMAPMMLPGMQHYLSRVGMGIGPPTIMLPGIHNLMRLSRLPPVDQATNGVSQAPVGMPN
LVMPMRSSSFQEQYANYMNFQSMQSASPQISTG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaccaatgactcttcttcccagctgctgctatttcccacttcaacacctatgg
cagaattttaaggtatggattcttgtcttcctgattggaacactgatgttggaggtgaat
tccctgtccctcttcaaagaaaaccttggattagagaatgagctggttgagctgttgtgg
caaaatggggagattgtgttgcatagtcaaaccaataggaagcaatcaaagcaatcacat
ggtgatgggacagtttcatggattgattgccctattgatgaaccttttgagagggaattc
tgtgctaatttcttgtctgagatccctccatcagaaggttttgctccgcctcctcctccg
agatttgaggcggctgaggtgcccggtaaaagcctggagtgctctggaatgactgtcggg
tcgagccattgtgcgagcaaccaagttgtgaataaagttgacatgagctgggcttctagc
tctggggttgggaaggcattaaacgagggcgtggagagggaggcacccgggcaggctagg
acgtctgcctctggtggatctggtagtagtagcctgtggaaaacgagcagcctgtcgaat
gagacgagcaggcacaagaggaagagccgtgacatggaagagtctgaatgcccgagtgat
gcgactgagtcggagtcggctgcagggaacaaggcgaagaacggggctgctcgtaggagc
ctcgtggctgaagtgcataacatgtctgagagaaggcgaagggaccggatcaacgagaag
atgaaggcgttgcaggagctcatccctcatgcaaacaattcagacaaagcgtcgatgtta
gacgaggcgatcgagtatatgaaggccttgcagatgcagattcagttgatgtggatgggg
agggggatggcgccgatgatgcttccgggcatgcagcactacttgtcgcgtgtaggtatg
ggaatcgggccgccaaccatcatgctgccggggatccataacctaatgcgcttatcgcgc
ttgcccccagttgatcaagctacgaacggagtgagccaagctccagtcgggatgccgaat
ctggttatgcctatgcggagctcgagttttcaagagcagtatgctaattacatgaacttc
cagtcgatgcaaagtgcttcgcctcagatttctactggctga
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