Salvia splendens (scarlet sage): 121755927
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Entry
121755927 CDS
T07627
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
sspl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121755927
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
121755927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121755927
Transcription factors [BR:
sspl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121755927
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
121755927
NCBI-ProteinID:
XP_042007305
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All DBs
Position
11:28135402..28139184
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AA seq
676 aa
AA seq
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MPLSEFLRMARGKLESSHQKPAPADMSSKPENELVELVWENGQVMMQGQPSRVTRSPTLT
TSGARDSTTARYGKYGVESIMNDMASVVPSGDLDLGQDDEIAPWLSYPMDDALGQGYASE
ILPHLSGVTTNGLSTQNSFASVDKRSSCGQTVSNLQSGANNVKVSSSKDRPYGSWLPQLH
RQTSDALGSGVTDIVSNNSKDQLDAVFRNPAQSRDTVSFQPPTNHSNFLNFSHFSRPATL
AKANLPNSDGIPKSVSSVVERNENKEKGSAANCSNPVKSIHLDQAKSMPKDFESHGSGVY
SAVGSSEPVVKASQDSCPPERADNLCKETPIKNDKPPILSNNYSSAKGAPEGDRTVEPMV
ASSSVGSGNSADRLSCEQTQYSKRKFCDIEDSECRSDDVETESVDAKKATCVRGSRRSRA
AEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGSG
LCMPPMMFPTGMQPMHPAHVPHFQPMGIGVGMGMAYGMGMPLDMNVGSSSCPIYPVPPLQ
VPHFSSTVPGLANFQRMPGQNHPVYGHPAQAYPSSVPRPPFVPLAPCPPVTCATGSSTLI
NCETPSTSQNIKSEDPAKTMTLQPICNAEARSSVHSKSNQPGKEVVDQSAGVQDNKRGTD
AAAATSTDINKEPGCD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttcagagtttttgagaatggctagaggaaaacttgaatctagccatcagaaa
ccggctccagccgacatgtcttctaagcctgagaatgaattagttgaactagtttgggag
aatgggcaggttatgatgcaaggtcagcccagtagggttacaagaagccctacacttacc
acatcgggagctcgtgattctaccactgcaaggtatggaaaatatggagttgagtctatc
atgaatgatatggcatcggtggtgccttcaggggacctggatttaggccaagatgatgag
atcgctccgtggttaagttatcccatggatgatgctctcggacaaggttatgcttccgag
attctacctcatttatctggtgttacgactaatggattgtctacacagaatagctttgca
tcagtggataagaggagtagttgcggacagactgttagtaatctgcagagtggggctaac
aatgtgaaggtttcttcttctaaagatcgtccttatggctcatggctgcctcagcttcat
cgccagacatcagacgccttaggatctggcgtcacggatattgttagcaataactcgaaa
gatcaactggatgctgtattcaggaatccagctcaaagtagagatactgttagctttcaa
ccacctactaatcattcgaattttctcaacttctcccatttctcaaggccagctactctt
gccaaagcaaacctcccgaactctgatggaattcctaagtcggtatcatcggttgtggag
agaaatgaaaataaggaaaaaggttcagctgccaattgcagtaatccagtcaagtctata
cacctcgatcaagctaagagcatgccaaaagactttgagtcccatggttctggtgtatac
tctgcggtgggttctagcgaaccagtcgttaaggcatctcaggattcatgccctccagaa
agagccgataatttgtgcaaagaaactcccatcaagaacgacaagcctccgattctaagc
aataactacagttcagcaaaaggagcccctgagggtgataggactgttgagcctatggtt
gcttcttcttctgttggctctggaaatagtgctgatagactttcttgcgagcaaacgcaa
tattcaaaaagaaagttctgcgatattgaggactcagaatgccgtagcgatgatgttgaa
accgaatctgttgatgcgaaaaaagcaacttgtgtacgaggatctaggagaagccgggca
gcagaagtgcataatctttccgaaaggagacggagagataggatcaatgagaaaatgcgt
gctttacaagaactcataccgaattgcaataaggcagataaagcatcaatgctcgacgaa
gccattgaatatctaaaaaccctccaactacaagtacagattatgtccatgggttcaggg
ctatgcatgcctccaatgatgttcccgaccggaatgcagccaatgcatcctgctcatgtt
ccacatttccaaccaatgggcatcggagtgggtatgggcatggcttacgggatgggtatg
ccgctagacatgaacgttggatcctccagctgtcctatataccccgttcctcccctccaa
gtaccacacttttcctctacagtgcccgggcttgccaatttccagagaatgcccggtcaa
aaccatccagtatacggtcatcctgctcaagcatatcccagttccgtcccaagaccaccc
ttcgttcctctagctccatgcccccctgtgacttgtgccacgggatcaagtactctgata
aattgcgaaactcctagtacatctcaaaatatcaagtccgaggatccagccaaaaccatg
accttgcagccaatctgcaacgccgaagctaggagctcagtccacagcaaatccaaccag
cctggaaaagaagtggtagatcaatcggctggtgtgcaagataacaaacgtggcacggac
gctgcagctgctacctcaacggacatcaacaaagaaccagggtgtgattag
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