Salvia splendens (scarlet sage): 121757262
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Entry
121757262 CDS
T07627
Name
(RefSeq) ATP-dependent helicase rhp16-like
KO
K15083
DNA repair protein RAD16
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121757262
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
121757262
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
121757262
NCBI-ProteinID:
XP_042008724
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All DBs
Position
12:729691..735172
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AA seq
769 aa
AA seq
DB search
MKLRSHGDGASSSKGKEKINYRESSDSEDDEEAPSDVGTSDSDGVPKRSKTESYAKRGSQ
SSKKAEEEESQDADTEIAGDIAEESGGKQKGREKKHRPMLLWKKLEQENNRWIEENLQTD
FDQVNQNEILITVEPSDDLIIPLLRYQKEWLAWALGQEESFARGGILADEMGMGKTLQAI
ALVLLKRSISTRSSSRESSQIKGTLVICPVGAVKQWAREIDRFTSKGSTKVFVYHGPDRG
KLFYQLSDYDFVITTYGVVEKEYSNYVMTPKEECWRCGKLLHVHKMKGHLRTCYLPQAVK
PNVEVNVSGRKEVENENSIESSVATGRTSSEGKHILHSVWERIVLDEAHCIKARYGTTTR
AVLALKSRYKWALSGTPLQNHVDELYSIIRFLQIVPFSYYCCKDCNCNTLDHSSAECPGC
GHKNARHFCWWLRYVSKPIRNSHGNPVSSKGAMILLKHKILKSLMLRRTKEGRAADLVLP
SRIVTLEKYSLDADEEDYYTALYNETQLQFNKYVRAGTLMNNYMHILALLTRLRQALDHP
YLVEYSPASMERKGKAVEFTTNNDGKKQKSKTTIKGFVPSSILNTIQLKGVQDFETSTKI
EALKEEIRIMVERDGSAKAIVFSQFLPFLDLIHYALQNSGVNCAHLDGSMAMEARDTAIQ
KFTEDPSCRVILMSLKAGGVALNLTAASHVFMMDPCWNPSIERQAQDRIHRIGQYKPIRI
VKFIIENTIEERVLKLQEQKESLIDGVLDGSSEALERLTTNDLIFLFAP
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccgctctcacggcgatggcgcttcttcttccaaaggaaaagagaagatcaac
tacagagagagttctgattcggaagatgatgaagaagcgccgagtgatgtaggtactagt
gattctgatggtgtcccgaagaggagtaaaactgagtcctatgcaaaaaggggaagtcag
agtagtaaaaaagctgaggaggaagagagtcaggatgcagatactgagattgctggtgac
atagctgaggaatctggtgggaaacagaagggtagggagaaaaaacataggccaatgtta
ttgtggaaaaaattagaacaggaaaataatagatggattgaagagaatttgcaaacagat
ttcgaccaggtaaatcagaatgagatactgataacagtcgagccttcagatgacttgata
attccactgctaagatatcagaaggagtggttagcttgggctttggggcaagaggaatct
tttgcccgaggtggcatccttgccgacgagatgggaatgggcaagactctccaggcaata
gcgctcgttcttctcaaaagaagtatctcaacacgaagttcgtcaagggaatcatcgcaa
ataaagggtacacttgttatatgtcccgttggcgctgtcaagcaatgggctagagagatc
gatcggttcacttcaaaaggaagcaccaaagtttttgtctatcatggtcccgaccgagga
aaacttttttatcagctttcggattatgattttgttataacgacatatggagttgttgag
aaggaatatagtaattatgtgatgactcctaaagaagaatgctggcgatgtggaaaactc
ttacatgtgcataagatgaaaggtcacttgagaacttgttatttgcctcaggctgttaag
ccgaatgttgaggtaaatgtcagtggtcgcaaggaagtggaaaatgagaattcaattgag
agttcagttgcgactggccgaacctcatccgagggaaagcatattttgcattcggtttgg
gaacgtattgtattggatgaggctcattgtatcaaagcaagatatggtactacgacaaga
gctgttcttgctctaaaatctagatataaatgggctttaagtggtactccccttcagaat
catgtggatgagctctactccattattcgctttctccagatagttcctttctcgtattat
tgctgcaaggattgcaattgcaatacgcttgatcacagttctgcagaatgccctggatgt
gggcataaaaatgctcggcacttctgctggtggttgagatatgtttctaagccgatacga
aatagtcatggtaatccggtgtccagtaaaggtgctatgattttgttaaagcacaaaatc
ttgaaaagcttaatgttaaggcgcacaaaagagggcagagcggctgatctcgtactacct
tctagaattgttaccttggaaaaatattcactcgatgctgatgaagaagactattataca
gcactctacaatgaaactcaattacagtttaataaatacgtccgtgcaggaacattgatg
aataactatatgcacatattggctctactgacacgcctacgtcaggcacttgatcatccg
taccttgtggaatattctcctgcttcaatggaaagaaagggcaaagcagtagaattcacc
accaacaatgatgggaaaaagcaaaagtcaaaaacgaccattaaaggattcgtaccgtcg
agtattttaaatacaattcagcttaaaggtgttcaggattttgagactagtactaaaatt
gaagccttgaaggaagaaattcgaattatggttgaaagggatggttctgccaaggcaatt
gtcttcagtcagttcttgcctttcctggatctcatacactatgcccttcaaaattctgga
gtgaactgtgctcatttagatgggtccatggccatggaagctagagatactgctatacaa
aaatttaccgaggatcctagctgcagagtgattttaatgagcttaaaagcagggggtgtt
gccctcaatctcacagcagcttcacatgttttcatgatggatccatgttggaatccttcc
atagagcggcaggcgcaagacagaattcatcgaataggccaatacaaaccaatccggatt
gtgaagtttattattgaaaacaccatagaggaaagagttttaaagttgcaggagcagaag
gaatcattaatcgatggtgttctggatggatcgtctgaggctctggaaagattaacaaca
aatgatctgatattcctgtttgctccctaa
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