Salvia splendens (scarlet sage): 121758124
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Entry
121758124 CDS
T07627
Name
(RefSeq) ATP-dependent helicase rhp16-like
KO
K15083
DNA repair protein RAD16
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121758124
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
121758124
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Sec20
Motif
Other DBs
NCBI-GeneID:
121758124
NCBI-ProteinID:
XP_042009488
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Position
12:736645..742320
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AA seq
776 aa
AA seq
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MKFRSHGDGASSSKGKEKINYRESSDSEDDEEAPSDVGEIEEQYCGNIDSHSASDPDGLP
KRRKTESYVKAGSQSSEKAEEEEREDDTQIVARILADLAGDIIERKLRPTLYWKELEQEN
DRWIEENWQTDFDQVNQNEIRITVEPSDDLIIPLLRYQKEWLAWALGQEESSAQGGILAD
EMGMGKTLQAIALVLFKRSISKGSFPTKLRQIKGTLVICPSIAVMQWAREIDRFTSKGST
KVLVYYGPDRGKNLYQLSDYDFVITTYGVVGKEYRNYVMPPKECQSCGELFRNLKGHLSS
CCGDRTVKPNLEVHNKNVSGHKELENDNSNGSSDRTSSEGKHILHHAIWQRIVLDEAHCI
KTKKNNTTRAVLALQSTYKWALSGTPLQNNVNELYSLIRFLRIVPLSFYCCRGCNCNMLD
LSSAGCPGCGHKSAWHFSWWKIYIHKPIVYDSPEVRRGSMMLLKHKILKSLMLRRTKEGR
AADLALPSRIVTLRRYSLDAVEEDYYTALNNNSRTQFNVYVNAGTLVNNYMHILALLTRL
RQALDHPYLVEYSPASMKSKGKAVDFTTNKDGKEQKSKTTIKGFRQSSILNRIQLEDFQD
FQTSTKIEALREEIRFMIERDSTAKAIVFSQFSSFLDLIHYALQESKVNCVNLDGSMSME
GKDTAIKKFTEDPNCRVILMALKAGGVALNLTVASHVFMMDPCWNPAIERQAQDRIHRIG
QYKPIRIVKFIIENTIEEKVLKLQEQKELTVKGILDGSSEALENLTTDDLIFLFVP
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaagttccgctctcacggcgatggcgcttcttcttccaaagggaaagagaagatcaac
tacagagagagttctgattcggaagatgatgaagaagcgccgagtgatgtaggtgaaatt
gaagaacaatattgtggtaatattgattcacacagtgctagtgatcctgatggtctcccg
aagaggaggaaaacagagtcctacgtaaaagcgggaagtcagagtagtgaaaaagctgag
gaggaagagagggaggatgatactcagattgtggcaagaattttagctgacttagctggt
gacataattgagagaaaacttaggccaacgttatattggaaagaattagaacaagaaaat
gatagatggattgaagagaattggcaaacagatttcgaccaggtaaatcagaatgagata
cggataacagtcgagccttcagatgacttgataattccactgctaagatatcagaaagag
tggttagcttgggctttggggcaagaggaatcttctgcccaaggtggcatccttgccgac
gagatgggaatgggcaagactctccaggcaatagcgctcgttcttttcaaaagaagtatc
tcaaaaggaagttttccaacgaagttacgacaaataaagggtacacttgttatatgtccc
tcgatcgctgtgatgcagtgggctagagagattgatcggttcacttcaaaaggaagcacc
aaagttttagtctattatggtcctgaccgtggaaaaaatctttatcagctttcggattat
gattttgttataacgacatatggagttgttgggaaggaatatagaaattatgtgatgcct
cctaaagaatgccagagttgtggggaattgtttcgtaacttgaaaggtcacttgagttct
tgttgtggggatcggactgttaagccgaatcttgaggttcataacaaaaatgtcagtggt
cacaaggaattggaaaatgacaattcaaatgggagttcagaccgaacctcatccgaggga
aagcatattttgcatcacgctatttggcaacgtattgtattggatgaggctcattgtatt
aaaacgaaaaaaaacaatacaactagagctgttcttgctctacaatctacatataaatgg
gctttaagtggtaccccccttcagaataatgtgaatgagctctactcccttattcgcttt
ctccggatagttcctctctcgttttattgctgcaggggttgcaattgcaatatgcttgat
ctcagctctgcaggatgccctggatgtgggcataaaagtgcttggcacttcagctggtgg
aagatatatattcataagccgatagtatatgattctccggaggtcagaagaggttctatg
atgttgttaaagcacaaaatcttgaaaagcttaatgttaaggcgcacaaaagagggcaga
gcagctgatcttgcgctaccttctagaattgttaccttaagaagatattcactcgatgct
gttgaagaggactattatacagcactcaacaataatagtcgaacacagtttaatgtatac
gtcaatgcaggaacattggtgaataactatatgcacatattggctctactgacacgccta
cgtcaggcacttgatcatccgtaccttgtggaatattctcctgcttcaatgaaaagcaag
ggcaaagcagttgatttcaccaccaacaaagatgggaaagaacaaaagtcaaaaacaacc
attaaaggattcagacagtcaagcattttgaatagaattcagcttgaggatttccaggat
tttcagacaagtaccaaaattgaagccttgagggaagaaattcgatttatgattgaaagg
gacagtactgccaaggcaattgtattcagtcagttctcgtctttcctggatctcatacac
tatgcccttcaagagtctaaagtgaactgtgttaatttagatgggtccatgtccatggaa
ggtaaagatactgctataaaaaaatttacggaggatcctaactgcagagtgattttaatg
gccttaaaagcagggggtgttgccctcaatctcacagtagcttcacatgttttcatgatg
gatccatgttggaatcctgccatagagcggcaggcgcaagacagaattcatcgaataggc
caatacaaaccaatcaggattgtgaagtttatcattgaaaacaccattgaggaaaaggtt
ttaaagttgcaggagcagaaggaattaacagtcaagggcattctggatggatcgtcggag
gctctggaaaatttaacaacagatgatctgatattcctgtttgtgccctaa
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