Salvia splendens (scarlet sage): 121758898
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Entry
121758898 CDS
T07627
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
sspl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121758898
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
121758898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121758898
Transcription factors [BR:
sspl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121758898
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
121758898
NCBI-ProteinID:
XP_042010264
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All DBs
Position
12:27288277..27292598
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AA seq
669 aa
AA seq
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MPLSEFLRMARGKLESSHQKPAPADISSKPENELVELVWENGQVMMQGQPSRVTRSPTLT
TSRARDSTTTRYGKYGVECIMNDMASVVPSGDMDLGQDDEIAPWLSYPMDDALGQGYASE
ILPHISGVTANGLSTQNSFASVDKRSSCEQTVSNLQSGANNVKVSSSKDRPFGSWLPQLH
RQTSDALGSGVTDVVSNKSKDQLDAVFRNPAQSRDSVSIQPPTNHSNFLNFSHFSRPATL
AKANLPNSDGIPKSVSSAVERNENKEKGSAANCSNPVKSIHLEQAKSMPKDFEPHGSGVY
PAVRSSEPGVKGSQGSCPPERTDNLCKEIPMKNDKPPILSNNYSSAKRAPDGDRTVEPMV
ASSSVGSGNSADRLSCEQTQHSKRKFCDIEDSECRSDDVETESVDAKKATCVRGSKRSRA
AEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGSG
LCMPPMMFPTGMPPMHPAHVPHFQPMGVGVGMGMAYGMGMPRDMNAGSSSCPIYPVPPLP
HFSSTVPGLANFQRMPGQYHPVYGHPSQAYPSSVPRPPFVPLAPRPPLTCAMRSSTLRNC
ETPSTSQNIKSEDPAKTMNLQPICNAEARSSVHNKSNQPGKEVVDQSAGVQDNKRATDST
DINKEPGCD
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttcagagtttttgagaatggctagaggaaaacttgaatctagccatcagaaa
ccggctccagccgacatctcttctaagcctgagaatgaattagttgaactagtttgggag
aatgggcaggttatgatgcaaggtcagcccagtagggttacgagaagccctacacttacc
acatcgagagctcgtgattctaccactacaaggtatggaaaatatggagttgagtgtatc
atgaatgatatggcatcggtggtgccttcaggggacatggatttaggacaagatgatgag
atcgctccgtggttaagttatcccatggatgatgctctcggacaaggttatgcttccgag
attctgcctcatatatctggtgttacggctaatggattgtctacacagaatagctttgca
tcagtggacaagaggagtagttgtgagcagaccgttagtaatctgcagagtggggctaac
aatgtgaaggtttcttcttctaaagaccgtccttttggttcgtggctgcctcagcttcat
cgccagacatcagacgccttaggatctggagtcacggatgttgttagcaataaatcgaaa
gaccaactggatgctgtattccggaatccagctcaaagtagagatagtgttagtattcaa
ccacctactaatcattcgaattttctcaacttctcccatttctcaaggccagctactctt
gccaaagcaaacctcccaaactctgatggaattcctaagtcggtatcgtcagctgtggag
agaaatgaaaataaggaaaaaggttcagctgccaattgcagtaatccagtcaagtctata
cacctcgagcaagctaagagcatgccaaaagactttgagccccatggttctggtgtatac
cctgcggtgcgttctagtgaaccaggcgttaagggatctcagggttcatgccctccagaa
agaaccgataatttatgcaaagaaattcccatgaagaacgacaagcctccaattctaagt
aataactacagttcagcaaaaagagcccctgacggtgataggactgtggagcctatggtt
gcttcttcttctgtgggctctggaaatagtgctgatagactttcttgcgaacaaacacaa
cattcaaaaagaaagttctgcgatattgaggactcggaatgccgtagtgatgatgttgaa
accgaatctgttgatgcgaaaaaagcaacttgtgtacgaggatctaagagaagccgggca
gcagaagtgcataatctttctgaaaggagacggagagataggatcaatgagaaaatgcgt
gctttacaagaactcataccaaattgcaataaggctgacaaagcttcaatgctcgatgaa
gccattgaatatctaaaaaccctccaactacaagtgcagattatgtccatgggttcaggg
ttatgcatgcctccaatgatgttcccgaccggaatgccaccgatgcatcctgctcatgtt
ccacatttccaacccatgggcgtcggagtgggtatgggcatggcttacgggatgggtatg
ccgcgagacatgaacgctggatcctccagctgtcctatatatcccgttcctcccctacca
cacttttcctctacagtgcccgggcttgccaatttccagagaatgcccggtcaataccac
cccgtatacggtcatccttctcaagcatatccgagttctgtcccaagaccacccttcgtt
cctctagctccacgcccccctttaacatgtgccatgcgatcaagtactctgagaaattgc
gaaactcctagtacatctcaaaatatcaagtcggaggatccagcaaaaaccatgaacttg
cagccaatctgcaacgcggaagctaggagctcagtccacaacaaatccaaccagcctgga
aaagaagttgtagatcaatcggctggtgtgcaagataacaaacgggccacggactcaacg
gacatcaacaaagaaccagggtgtgattag
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