KEGG   Salvia splendens (scarlet sage): 121792338
Entry
121792338         CDS       T07627                                 
Name
(RefSeq) 5'-3' exoribonuclease 4-like
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    121792338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121792338
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     121792338
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC
Other DBs
NCBI-GeneID: 121792338
NCBI-ProteinID: XP_042046177
LinkDB
Position
2:34066823..34079158
AA seq 980 aa
MGVPAFYRWLADRYPLCIVDVVEEEPGQDERGVPRPVDVSRPNPNGIEFDNMYLDMNGII
HPCFHPDGKPAPTTYADVFKSIFDYIDHVVSLVRPRKLLYLAIDGVAPRAKMNQQRSRRF
RAAKDAAAAEAEEENLRKEFELEGEKLLPKGKTETSDSNVITPGTPFMAVLSVALQYYVQ
SRLNRIPGWHFLKVILSDANVPGEGEHKIMSYIRLQRNIPGFDPNTRHCLYGLDADLIML
SLATHEVHFSILREVITLPGHQEKCFLCGQAGHLAAECRGGSNGDSTKNADDTPIHKKKY
QFLNIWVLREYLGYELNIPNPPFEIDFERLVDDFVFLCFFVGNDFLPHMPTLEIREGAIN
LLMFVYKREFTAMGGYLTDAGEVFLDRVETFVQAVAVHEDQIFKKRTRIQQAYENNEEMK
QRARGQASQIPNASAGDKVKLGEHGYKERYYSEKFGTSDPQKIDEIRTDVVLKFVEGLCW
VCRYYYQGVCSWQWYYPYHYAPFASDLKGLADLEITFFPGEPFKPFDQLLGTLPAASSTA
LPERYRTLMTDPASPIVDFYPNDFEIDMNGKRFAWQGVAKLPFIDEKKLLAETKKLEETL
TEEEQFRNSVMFDLLYVHPRHPLAAQITIYYRLSGIEKSPWPIDAVASAGMNGFLWLTKR
NGLKKVIPSPVCSLEDITNDQALNITYLNPAPHAHIPKPPAGVNMPVKIVKSFDIKPAPV
LWHEDNGGRHHLGKERPQVSGAISGPILGEAAHRLVHNTLNIKSDRMNSRNFHGNQVANR
MRPAGPPGYEMGVSEIQNSQNRHASYRPRAVVPSGYGRYGNNEQGYYNNSNSFSVQHSPH
TPMGSARYIGPPDNLQINRPIYNAQDRYTYQEQHHVLRGGMSALTIDGGSSKGRSLAGSS
PRPSNSVQISQTTAQLPQQRGPLPSPPPKWISKHPAEATEMYYKQQSSVAAGQGGPVKLA
SRYQVKNKTVQNGVDPQLRQ
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgggggttcctgctttttaccggtggctggcggatcggtacccgctgtgtattgtggat
gtggtggaggaagaacccgggcaggacgagaggggtgtgccccgccctgtcgatgtttcg
aggccaaaccctaatggcattgagttcgataatatgtatttggatatgaatggtattatt
catccttgtttccaccccgacggcaagcctgcacctaccacttatgcagatgtatttaaa
tctatctttgattacattgaccatgtcgtgtcattggttcgtccaagaaagctcctttat
ttggcaattgatggtgtggctcccagggctaaaatgaaccagcaaaggtctcgtcgtttc
agggctgctaaggatgctgcagcagctgaagctgaagaagaaaatttgaggaaagagttt
gaacttgagggggaaaaactattgccaaaaggaaagactgaaacatctgattcaaatgtt
atcacccctggcaccccatttatggcagtgctctctgtagcacttcaatattatgtgcag
tcaaggttgaaccgcattcccggatggcactttctcaaggttattctttctgacgcaaat
gttcctggtgagggcgagcacaaaattatgtcttatattcgtttacaacgcaatattcct
ggttttgatccaaacaccaggcattgtctatatggcttggatgctgacctgatcatgctc
tcactagctactcatgaagttcacttttcaatactgagagaggtgattactcttcctggg
caccaggaaaaatgcttcctctgtggccaagcaggccatctggcagctgaatgtcgtggg
ggatccaacggtgatagtacaaagaatgcagatgacactcccattcataagaagaagtat
cagtttctcaacatctgggttttgcgagaatacttgggatatgagctgaatattccaaat
cctccatttgaaattgatttcgagaggctggtggatgattttgtgtttttatgctttttt
gtcggcaatgactttcttcctcacatgcccacgttggaaattagagagggcgccataaat
ttgctcatgtttgtatataaaagggaattcactgcaatgggcggttatcttacagatgct
ggtgaggttttcttggaccgggttgaaacttttgttcaggcagttgcggtgcatgaagat
caaatttttaaaaaaagaacccgtatacagcaggcatatgagaataatgaagagatgaag
caaagagcaagggggcaggctagtcaaattcctaatgcttcagcaggggataaggtgaag
ttaggggaacatggatataaagaaaggtattattctgagaaatttggtacatctgatccg
cagaagattgatgaaatacgaacagatgtggttttgaagtttgtggaagggctgtgttgg
gtttgccgctattattaccaaggtgtctgctcatggcagtggtactatccataccattat
gctccatttgcatctgatcttaaaggcttagctgatttagaaatcactttcttcccaggg
gagccttttaaaccctttgatcagttgttgggaaccctaccagctgcaagttctaccgct
ctccctgaaagatacagaacgttgatgactgatcctgcatcacctattgttgatttctat
ccaaatgattttgaaatcgacatgaacggaaaacgctttgcttggcagggtgttgccaaa
ttacctttcattgatgagaagaaattgcttgctgagaccaagaagctcgaggaaacttta
acggaggaagagcagtttcggaatagtgtcatgttcgatttgttgtatgttcatcctcgt
caccctttggcagctcaaataaccatatactatcgtctttctggaattgaaaaatcccca
tggcctattgatgcagttgcaagtgctggaatgaacggatttttgtggttaactaaaagg
aatggcttgaaaaaggttatcccttcacctgtctgcagtttggaagatatcacaaacgat
caagccctaaatatcacatatcttaatccagcacctcatgctcacattccaaaacctcct
gcaggtgttaatatgcctgtaaagatagtgaaatcttttgacataaaaccagccccagta
ttatggcatgaagacaatggtggaaggcaccatctaggcaaagaaagaccacaggtttcc
ggggcaatatctggtcctattttaggagaagctgctcatcgtctggttcacaatacgttg
aacataaagtcggaccgtatgaattctcgcaattttcatgggaatcaggttgccaacagg
atgaggccagctggaccgcctgggtatgaaatgggagtttcagagatccaaaattctcag
aatcgccatgcttcttataggccaagagcagtcgtgccttctgggtatggtcgatatggt
aacaacgaacagggatattataacaactcaaactcttttagtgtccaacacagccctcac
actccgatgggaagtgctcgatacattggccccccagataatttgcaaatcaacaggccg
atttacaatgctcaagatagatatacatatcaggaacagcatcatgttctgagaggcggc
atgtctgcattaactattgatggtggttcttccaaaggcaggtcacttgctggatcttct
ccaaggccgtcaaattctgttcagatatcacagaccactgctcaactcccacagcagaga
ggtccgcttccatctccgcctcctaaatggatcagtaaacatccagccgaggctacagaa
atgtattataagcaacagagttcagtagcagctgggcaagggggaccagtgaagctggct
agccgctatcaggtaaaaaataagacggtgcagaacggcgttgatccacaactccggcag
tga

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