Salvia splendens (scarlet sage): 121794375
Help
Entry
121794375 CDS
T07627
Name
(RefSeq) transcription factor PIF1-like
KO
K16189
phytochrome-interacting factor
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121794375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121794375
Transcription factors [BR:
sspl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121794375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
121794375
NCBI-ProteinID:
XP_042048441
LinkDB
All DBs
Position
3:complement(3028166..3032019)
Genome browser
AA seq
486 aa
AA seq
DB search
MNHCVPDFHEMDEDDSIPTPSSFSRLKKTTTGEEDIMELLWQNGQVVVQSQNQRPPYRGG
SGEVVIPSEREIRSTAEEQQHLFIQEDEMASWLLDDSSFDRDFYADLLYSAPPPPPLTTA
AAEIPAPVARPDNPPRVQNFVHFSRLPIRPRPAARESSTVVESNDTPAAAPESRVSDSGP
PLNADSATMRTGGTSAAAGTCDLTAASSPGSSPTSFSGDTHQPQHKPAALPEDRKRKVRE
ADDNECQSEDIEFEAAECKKQGCGSASTKRSRAAEVHNLSERRRRDRINEKMRALQELIP
RCNKSDKASMLDEAIEYLKSLQLQVQMMSMSCGMVPMMYPVGVQQYMPAAMGLGMGMGMG
MDMGMSRPMVPYPPMMAGSAMPNPAAAAAHMGPRFPLPPFHMQPVPVPDPSALQPTNRTD
HVSNSTAIPQNQNQPRFQNFPDPYQQYLGFHPTLLPIPQNQGVVQHDANKPSTSKDIGNP
HNQQTG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatcactgcgttccggattttcatgaaatggatgaggacgattcgattcccacgcct
tccagtttttctagactcaaaaagactaccacaggtgaagaggatatcatggagctgcta
tggcagaacggtcaagtagtggtgcagagtcagaatcagagaccgccgtataggggcggc
agcggagaggtggtgattccgtcggagagggagatcagatcgaccgcggaggagcagcag
catttgtttatccaggaggatgagatggcgtcttggcttctcgatgattcctccttcgat
cgcgatttttacgccgatctcctctattccgctcctcctcctccgcctctcaccaccgcc
gccgctgagatcccggctccggtcgccagacctgacaatccgccgcgggtgcagaatttc
gtgcatttctcgaggctcccgatcaggccgaggccggcggcgcgagaatcgtccacggtg
gtggagtcaaatgacacgccggcggcggcaccggaatctagggtttctgacagcgggccg
ccgctgaacgcggatagcgccaccatgagaactggaggcacttcggctgccgcgggtaca
tgtgacctcaccgccgcctcgtcgcccggcagctccccgaccagcttcagcggagatacg
catcagccgcagcacaagccagcagcactgccggaagatcggaaacggaaagttagagaa
gccgacgataatgagtgtcagagtgaggatatcgagtttgaagctgctgaatgtaaaaaa
caaggctgtggttcagcgtcgacaaagagatcacgtgctgcagaagttcacaacctgtca
gagaggaggcggcgagacaggataaatgagaaaatgagggcactacaagaactcatccca
cgttgcaataagtcagacaaagcttcaatgctggatgaggctattgaatacttgaaatca
cttcaattacaagtacagatgatgtcgatgagttgtgggatggttcccatgatgtatccg
gtgggggtgcagcagtacatgcctgctgctatggggttaggaatggggatgggaatgggg
atggacatgggaatgagccgtccgatggtcccttatccacctatgatggccggctcagcc
atgccaaatcctgcagccgcggcagctcatatgggtcctagatttcccctccctccattt
catatgcaaccagttcccgtacccgatccttcagcattacagcctactaaccgcacagat
catgtctcaaactcgactgctattcctcagaatcagaaccagccaaggtttcaaaacttt
cccgatccgtatcaacagtatcttggtttccaccccacactactaccaataccacagaat
cagggggtggtgcagcatgacgccaacaaaccaagcaccagcaaagatattggcaaccca
cacaaccagcaaactggataa
DBGET
integrated database retrieval system