Salvia splendens (scarlet sage): 121798665
Help
Entry
121798665 CDS
T07627
Name
(RefSeq) transcription factor PIF1-like
KO
K16189
phytochrome-interacting factor
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121798665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121798665
Transcription factors [BR:
sspl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121798665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
121798665
NCBI-ProteinID:
XP_042053719
LinkDB
All DBs
Position
4:13172579..13176590
Genome browser
AA seq
486 aa
AA seq
DB search
MNHCVPDFHEMEEADLIPTPSSFSTLKKTTTGEEDIMELLWQNGQVVVQSQNQRPPNRSG
SRSGSGEVVIPLEREIRSSAEEQQHLFIQEDEMASWLLDDSSFDRDFYADLLYSAPPPLP
EIRPPPIPPPVARPDNPPRVQNFVHFSRLPIRPRPPARESSTVVESNETPAPAPESRVSH
SGPPDSATVRTGGTSAAAGTCDLTAASSPGSSPTSFSGDTHQPQHKLAAAPEDRKRKVRE
ADDNECQSEDIEFEAAEGKKQGCGSASTKRSRAAEVHNLSERRRRDRINEKMRALQELIP
RCNKSDKASMLDEAIEYLKSLQLQVQMMSMSCGMVPMMYPVGVQQYMPAAMGLGMGMDMG
MSRPMVPYPPMMAGSAMPNPAAAAAHMGPRFPLPPFHMQPVPVPDPSALQPTNRADHVSN
STAIPQNQNQNQNQPRFQNFPDPYQQYLGFHPTQLPIPQNQGVVQHDANKPSTSKDIGNP
HNQQTG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatcactgcgttccggattttcatgaaatggaggaggccgatttgattcccacgcct
tccagtttttctacactcaaaaagactacgacaggcgaagaggatatcatggagctgcta
tggcagaatggtcaagtagtggtgcagagccagaatcagagaccgccgaataggagcggc
tcccgcagcggcagcggagaggtggtgattccgttggagagggagatcagatcgagcgcg
gaggagcagcagcatttgttcatccaggaggatgagatggcgtcttggcttctcgatgat
tcctccttcgatcgcgatttttacgccgatctcctctattccgctcctcctcctctcccg
gagatccgccccccgccgatcccgccgccggtcgccagacctgacaatccgccgcgggtg
cagaatttcgtgcatttctcgaggctcccgatcaggccgaggccgccggcgcgagaatcg
tccacggtggtggagtcaaatgagacgccggcgccggcaccggaatctagggtttctcac
agcgggccgccggatagcgccaccgtgagaactggaggcacttcggctgcggcgggtaca
tgtgacctcaccgccgcctcgtcgcccggtagctccccgaccagcttcagcggagatacg
catcaaccgcagcacaagctcgcagcagcgccggaagatcggaaacggaaagttagagaa
gccgacgataatgagtgtcagagtgaggacatcgagtttgaagctgctgaaggtaaaaaa
caaggctgtggttcagcgtcgacaaagagatcacgtgctgcagaagttcacaacctgtca
gagaggaggcggcgagaccggataaatgagaaaatgagggcactgcaagaactcatccca
cgttgcaataagtcagacaaagcttcaatgctggatgaggctattgaatacttgaaatca
cttcaattacaagtacagatgatgtcgatgagttgtgggatggttcccatgatgtacccg
gtgggtgtgcagcagtacatgcctgctgctatggggttaggaatggggatggacatggga
atgagccgtccgatggtcccttatccaccaatgatggccggctcagccatgccaaatcct
gcagccgcggcagctcatatgggtcctagatttcccctcccaccatttcatatgcaacca
gttcctgtaccggatccttcagcgttacagcctactaaccgcgcagatcatgtctcaaac
tcgactgctattccacagaaccagaaccagaaccagaaccagccaaggtttcaaaacttt
cccgatccgtatcaacagtatcttggtttccaccccacacaactaccaataccgcagaat
cagggtgtggtgcagcatgacgccaacaaaccaagcaccagcaaagatatcggcaaccct
cacaaccagcaaactggataa
DBGET
integrated database retrieval system