Salvia splendens (scarlet sage): 121801447
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Entry
121801447 CDS
T07627
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
sspl04120
Ubiquitin mediated proteolysis
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121801447
04120 Ubiquitin mediated proteolysis
121801447
09124 Replication and repair
03420 Nucleotide excision repair
121801447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121801447
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121801447
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
121801447
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
121801447
Multi subunit type E3
SCF complex
Ring finger protein
121801447
Cul2 complex
121801447
Cul3 complex
121801447
Cul4 complex
121801447
Cul7 complex
121801447
Cul8 complex
121801447
Cul9 complex
121801447
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
121801447
TCR (transcription coupled repair) factors
Cul4-CSA complex
121801447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
121801447
NCBI-ProteinID:
XP_042056872
LinkDB
All DBs
Position
4:complement(39533039..39535533)
Genome browser
AA seq
122 aa
AA seq
DB search
MSTLDTDVNMVPAGEGSSGAGPSTTTPHSCKKSKKFEIKKWNAVSLWAWDIVVDNCAICR
NHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKY
GH
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacactcgacaccgacgtcaacatggttccggccggagagggctcatccggcgcc
ggcccttccactaccacgccgcactcctgcaagaaatctaagaaattcgagattaaaaag
tggaacgccgtctcgctttgggcttgggatatcgtggtcgataattgtgctatttgcagg
aaccacatcatggatctatgcattgagtgccaggctaatcaagctagtgcgacgagcgag
gaatgcacggttgcttggggggtttgcaaccatgctttccacttccactgcatcagcagg
tggcttaagactcgccaagtttgtcctcttgacaacagcgagtgggagtttcagaagtat
ggccactag
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