Salvia splendens (scarlet sage): 121805451
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Entry
121805451 CDS
T07627
Name
(RefSeq) nuclear pore complex protein GP210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121805451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121805451
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121805451
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_1st
Ig_NUP210_7th
Big_2
Ig_NUP210_5th
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_16th
Ig_NUP210_13th
Ig_Eae
Invasin_D4
Ig_NUP210_9th
Motif
Other DBs
NCBI-GeneID:
121805451
NCBI-ProteinID:
XP_042061234
LinkDB
All DBs
Position
5:32762095..32769180
Genome browser
AA seq
1932 aa
AA seq
DB search
MLPLLLLFLLHHATSFPTPGPHITDVNILLPPKMTFPVEYRLQATDGCFKWSWDHHDILS
VLPEFNASSRCSTSARLRSIAPYGGRKETAVYATDLNTGMVIRCKVYVDSISKIKIFHNS
VKLDLDGLATLRVRAFDSEDNVFSSLVGLQFMWQLMPETHEMHHSLVHVPLKESPLSDCS
GFCGDLDIQINLEESGVFSDFYVVKGTEIGHEIVSVNLLESSVGHLEDEIAITVAEAMSL
DPPSPVHVLIGAVVRYTLKVIRSNIPHVVSLPSPFHQWSVLNSSVAQVDRAVGTVHALNL
GVTAVAVEDTRVVGHMQISSLHVVIPDNMLLFMSPLSSSGDRIEDIEPIPSVSRWYVVAG
RLYIILVKVFSPGRGAHEVYITESDEIKLNSNQDEFWNILPLSEGATAMSNYRMLDAKSY
GLGKLTATLAYHTGHDVKKEVLKVFQEVMVCDQIKFITEGGSGDVDKILLPWVTGVYQEL
ELRASGGCSMSSSDYKWFSSDMSIASVSVSGIVQAKKPGKAIIRAVSIFDSLNYDEVVIE
VSVPHSMVLLPNFPTEAPVGSHVQASVTLKASTGAYFYACDAFRSFIRWKTESDSFIIVN
TSTEVFIPDIKEAAERHFVPYGPPCSWTNIYAASSGRTLVHATLTRDHQLAEHAGRESVV
LKASSPIAAFLPLIIHQASDGNQFGGYWFNWVHAESQNQLGSLDYLYLVPGTHLDVMLHG
GPERWGKDVEYVENVAVMAEQDGLVKDKISVHQIPTSYGNPYRIGCDSLGTFRLVFRRGN
LMGEDHHLPVVSEVQLLLICNFPSSIVIIADEAMNTPLAIQSAARAERLPSRMRTTPIKV
ANGRKIRASAVGLSDSGKAFANSSSILLSWELAECEGLALWDETESSTLYSSWERFLILQ
NTSGLCTVRSTAVSFHSLGHNYFAAKFETSIDTLTDAIQLQLVSSLGVTPEFSLLFFNPE
ARLNISITGGSCFLDTLVNDTHIVEVIQQIPDYDCSQLTLAPKSLGSALVTVQDVGLVPP
LSASSTVQVADMDWIKISTGEHISIEKGSLQSINFLVGVSDGRTFDPSQYIYMKINVHVE
EDIVDVMESNDTPFVANRYLCGGPTFTLQGTHLGVTTIYLSAVQYSGHEIVSQPIKVEVY
APPILHPHDIFLVPGASYVLSVRGGPKIGSQVRYFSLDDQTAQIHKFSGQLSAISPGNST
LVATIYGVGDTMLCRAYGIVKVGIPSSAILNAQSEQLAVNCKMPIYPSLSEGNLFSFYEL
CNNFKWTVGDKDVLDFQGAEHAHGRGNRSLKTSLNELDLNFVQVLRGISAGKTKVSVSFS
CNFKNSNSLLKSMFYTASVSVSVVPDLPLALGSPITWILPSYYTSSDLLPLSSHAYSKGG
SLSDKGIAYSLLGLEKGKIDELRDNDLYIDGAKIVTKDSDSVACILAKDKTSGRTDVASC
VRVGELDQIRMADEFHVHMVALDADLTLPIRYHDVLGNPFHEAHNITLFEVDTNYPHIVS
IGKYDGHGTINLHAKSEGLALVQVSFINNPRKAVYVVISVGPQLYPQNPVIHQGASLNFD
IKGLGDSASGQWFSSNESVVSIESLSGKAEATGEGKALVHFEGTSSSFKLHTTVTVLKGN
IISVDAPNEVITNVPIPVEGYAFSVKFNDEVSGRKMLSSFDCAVTPPKIGFARPWKDPYT
GSMHCLFFPHSPPHLARSAANTGGDSPHQVLVSIRASLTDDHQISGSASALFVGGFVLET
DGKNSLHMNLTPDSNKRVITLTGNTNVELSWRDRNNLIVRPIYGGDPAVAKYEIRARGPT
RIQDHLVFSLPSTGQKVEVSVSYDPRDRETAMKPANLTFWAGISALLFLLIFTVIFGICY
LDRPDRSPPQVAFGSPGIAAPATPKRSSPAVVNEHSPRTPPQLFIDYVRSTIDETPYYRQ
DFRRRANPQHTF
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgctcctcctcctcttccttctccaccatgcgacgtcgtttccgacccccggt
ccccacatcaccgacgtcaacatactcctcccgcccaaaatgaccttccccgtcgagtac
aggcttcaggccaccgacggctgcttcaaatggtcgtgggatcatcacgacatactatcg
gtgttgccggagttcaatgcgagcagccgctgctcgactagtgctcggttgaggtcgatt
gcaccctacggcggccgcaaggagactgcggtttatgccactgacttgaacactggaatg
gtgattaggtgcaaggtttatgtggattcaatatctaagattaagatattccataactct
gtcaagcttgatctggatggactcgctactcttcgtgttcgagcatttgactctgaagac
aatgtcttctcctccctggtgggcctgcaattcatgtggcagttgatgcctgaaacccac
gaaatgcatcatagccttgtccatgttcctttgaaggagtctccattgagtgattgcagt
ggcttttgtggtgacttggatattcaaataaaccttgaagaaagtggtgttttttcagac
ttttatgtagtaaagggcactgaaattggccatgagattgtttctgttaatctgctggaa
tcatcagtggggcacttggaggatgaaattgcaataactgttgcagaagcaatgtctcta
gatcccccatcacccgtacatgtccttattggtgctgttgttcgttatactcttaaagtc
atccgtagcaatattccgcatgttgtaagtttaccatctccgttccatcaatggtctgtt
ctgaactcctcagtggctcaagtggatagagccgtgggtacagttcatgcattgaacttg
ggggttacagcagttgctgttgaagataccagggtcgtaggacacatgcaaatatcatct
cttcatgttgtcatacctgataatatgttgttattcatgtctcctctttcttcttctggt
gatcgtattgaggatattgagcccattccctccgtgtctcgctggtatgtagtggctggc
cgtctatatataattcttgttaaggtcttctctccaggccgtggagcacatgaagtttat
ataacagaaagtgatgaaataaagttgaacagtaaccaagatgaattctggaatattctt
ccactttcagaaggtgctactgctatgagcaattatagaatgttagatgcaaaatcatat
ggtctgggaaagcttactgcaactttggcttatcacactggtcatgatgtaaagaaagaa
gttcttaaggtttttcaagaagtcatggtatgcgatcaaataaaatttattactgaagga
ggcagtggtgatgtggacaaaattctcctcccatgggtcactggtgtctatcaggaactg
gagcttagagcgagtggaggttgctcaatgtcctccagtgactataagtggttttcttca
gacatgtctattgcttctgtatctgtctctgggatcgttcaggcaaaaaagcctgggaag
gcgattattagagcagtgtccatctttgattcattgaattacgatgaggtggttattgaa
gtttccgttccccattcaatggtcttgctgcctaactttccaacggaagcacctgttggc
tcacatgttcaagcgtccgttacattgaaagcatcaactggtgcatatttctatgcatgt
gatgctttccggtccttcatcagatggaaaaccgagagcgactcattcataattgtcaat
acaagtacggaagtgtttattccggacataaaagaagctgctgaacgacatttcgttccg
tatggtcctccgtgttcatggacaaacatatatgctgcaagttctggtcgaactttggtg
catgcaacattgaccagggatcatcaactagcagaacatgctggtagggaatctgttgtc
ttgaaagcatcctcacctattgctgcatttttaccacttattattcaccaggcaagtgac
gggaaccagtttggtggttattggttcaattgggttcatgctgaatctcaaaatcagctg
ggcagtttggattatctgtatcttgtgcctggcactcacttggatgtaatgcttcacggg
ggaccggaaagatggggcaaggatgttgagtacgttgagaatgttgcagtgatggctgaa
caggatggtcttgtgaaagataagatttcggtccatcaaataccaaccagttatgggaat
ccatacagaatcgggtgtgatagcttgggaacctttagacttgttttcagacgtggaaac
ttaatgggagaagaccatcatttacctgttgtatctgaagtgcagttgttgcttatatgc
aactttccatcatcaattgtaataatagctgatgaagctatgaacacgcctctagctata
cagtctgcagctcgggctgaacggttgccgagcagaatgcgcaccaccccaattaaagta
gccaatggacgtaaaatacgagcatcagctgttggtcttagtgattcgggaaaagctttt
gcaaattcatcttctatccttttgagttgggaattagctgagtgcgaaggactggctctc
tgggatgagactgaaagttcaacattatattccagctgggaaaggtttttgatcttgcag
aatacatctggactctgtactgtgcgttccaccgctgttagctttcactctttgggccat
aattattttgctgctaagtttgaaacttctatcgatactcttacagatgcaatccagctg
caactcgtttcgtctcttggagtcactccagaattcagcttgttgtttttcaatcctgaa
gctaggttgaatatctctataactggagggagctgttttctggacacattggtaaacgat
actcatattgtcgaagtaatacaacagatccctgattatgattgttcacaactaacgttg
gctcctaaaagcctaggctctgcacttgtaactgttcaggatgttgggctagttcctcct
ctctctgcatcttcgactgtccaagttgcagacatggactggatcaagatttcaaccggt
gaacatataagcattgagaagggaagtttgcagtctataaactttttggttggggtcagt
gatgggcgtacttttgacccttctcagtacatttacatgaaaataaatgtccacgttgaa
gaagatatagttgatgttatggagagtaatgacactccatttgttgctaatagatactta
tgtggtgggccaactttcacgctgcaaggcacgcatcttggagtgacaacaatatatctt
agtgctgtccaatattctggacatgaaattgttagccagccaattaaggtggaagtatat
gcaccaccaatattacatccccatgacatatttcttgtaccaggtgcttcttatgtgctt
tcagtcaggggaggccctaaaattggttcacaggttcggtatttcagtttggatgatcaa
acagctcaaattcacaagttctcagggcaactatcggcaatttcaccagggaacagtact
cttgttgccacaatttatggtgttggtgataccatgctttgtcgagcatatggcatagtt
aaagttggaattccttcatcagccattttaaatgcccagagtgaacaacttgctgttaac
tgcaagatgccaatatatccttcactatcggagggaaatctgttttccttctatgaactc
tgtaacaatttcaagtggactgtgggagacaaagatgtgttggattttcaaggagcagag
catgcacatggtcgaggcaacagaagtctgaaaacatccttaaatgagcttgacctcaac
tttgtacaagttcttcgtggaatatcagctggcaagacgaaagtttcagtttcgttctca
tgcaatttcaagaattccaattcgttgttaaaatcaatgttctacactgcatctgtgtca
gtatcagtggtccctgatcttccacttgctcttggatcaccaattacctggatccttcct
tcttactatacctcttctgatctcttacctttatcttcacatgcctacagtaaagggggt
tctttgagtgataaaggcattgcttattccttgttaggactggaaaaggggaaaattgat
gagttacgtgacaatgatttatatattgatggtgctaaaatcgtaactaaggactcggac
agtgttgcatgcatactagcaaaagacaagacaagtggaagaactgacgttgcatcttgt
gtaagggtgggggagttggatcaaatcagaatggcggatgagtttcacgttcacatggtt
gctttagatgctgatcttacccttcccatcaggtatcatgacgttcttggaaatcctttc
cacgaggcacataacatcacgctgttcgaagtggataccaactatcctcacattgtatca
attggcaaatatgatggtcatgggactatcaatcttcatgccaaaagtgaaggtttagct
cttgttcaagtgtctttcatcaataatcctcggaaagcagtatatgttgtgatctctgtt
ggtcctcagctgtatccacagaatcccgtcattcaccagggagcaagtctcaactttgac
ataaaaggtttaggtgattcagcatcagggcagtggttcagttccaatgagagcgttgtg
tctattgaaagtctatctggaaaagctgaagccaccggagaaggtaaagccctagttcac
tttgagggcacaagttcgagtttcaagcttcatacgacggtcacggtgttgaaagggaac
atcatctctgttgatgctcccaacgaggttatcactaatgtgccaattccagtagaagga
tatgctttctcagtgaagttcaatgatgaagtttctgggagaaagatgctaagctcattt
gattgtgctgttactccaccaaaaatcgggtttgccaggccttggaaggatccctacact
ggcagcatgcactgcctgttcttccctcactctcctccacatttagcgcgttcagcagcc
aacacaggaggagattcgccacaccaggtgcttgtttctattcgagcttcgctaacggat
gatcatcaaatttctggctctgcatctgctctcttcgttggaggatttgtccttgaaact
gatgggaagaactcactgcatatgaacctgactccagactccaacaagcgtgtcataacc
ctaactggaaacaccaacgtcgagctcagttggcgagacaggaacaacctgatcgttaga
cccatctacgggggcgatcctgctgtagcaaagtatgagattcgcgcccgtgggcccacc
agaatccaggatcatctcgttttctcactgccatcaactggccagaaagttgaagtcagt
gttagctacgatcctcgtgacagagaaacagccatgaaaccagcgaacctcaccttctgg
gctggtatatctgctctcctctttctactgatattcacagtgatctttggcatatgttac
cttgacagacccgatagatcaccgccgcaagttgccttcggcagcccgggcattgcggct
cctgccaccccaaagcgcagcagtccggccgtggtcaatgagcattcgcctcggacacca
ccacagctattcatcgactacgttaggagcaccatagatgaaactccttattacaggcaa
gactttaggaggagggctaatcctcaacacaccttctag
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