Salvia splendens (scarlet sage): 121807354
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Entry
121807354 CDS
T07627
Name
(RefSeq) nuclear pore complex protein GP210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121807354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121807354
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121807354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_1st
Big_2
Ig_NUP210_7th
Ig_NUP210_5th
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_16th
Ig_NUP210_15th
Ig_NUP210_13th
Ig_NUP210_9th
Motif
Other DBs
NCBI-GeneID:
121807354
NCBI-ProteinID:
XP_042063508
LinkDB
All DBs
Position
6:28849369..28856476
Genome browser
AA seq
1931 aa
AA seq
DB search
MLPLLLLFLLHHATSFPTPGPHITDVNILLPPKMTYPVEYRLQASDGCFKWSWDHHDILS
VLPEFNASSRCSTSARLRSIAPYGGRKETAVYATDLNTGMVIRCKVYVDSISKIKIFHNS
VKLDLDGLATLRVRAFDSEDNVFSSLVGLQFMWQLMPETHEMPHSLVHVPLKESPLSDCS
GFCGDLDIQINLEESGVFSDFYVVKGTEIGHEIVSVNLLEPSAGHLGDEIVITVAEAMSL
DPPSPVHVLIGAVVRYTLKVIRSNIPHVVSLPSPFHQWSVLNSSVAQVDRAVGTVHALNL
GVTAVAVEDTRVVGHMQISSLHVVIPDNMLLFMSPLSSCGDRIEDIEPIPSVSRWYVVAG
RLYMILVKVFSPGPGAHEIYITESDEIKLHSNQDEFWNILPHSEGATAMSNYRMLDAKSY
GLGKLTATLAYHTGPEVKKEVLKVFQEVMVCDQIKFITEGDRGDVDKILLPWVTGVYQEL
ELKASGGCSMSSSDYKWSSSDMSIASVSVSGIVQAKKPGKATIRAVSIFDSLNYDEVVIE
VSVPHSMVLLPNFPTEAPVGSHVQASVTLKASTGAYFYACDAFRSFIRWKTESDSFIIVN
TSTEVFIPDIKEAAERHSFPYGPPCSWTNIYAANSGQTLVHATLTRDHQLSEHAGRDSVV
LKASSPIAAFLPLIIHQASDGNQFGGYWFNWVHAESQNQLGSLDYLYLVPGTHLDVMLHG
GPERWGKDVEYVENVAVMAEQDGLVKDKISVHQIPTSYGNPYRIGCDSLGTFRLVFRRGN
LMGEDHHLPVVSEVQLLLICNFPSSIVIIADEALNTPLAIQSAARAELLPSRMRATPIKV
ANGRKIRASAVGLSDSGKAFANSSSIFLSWELAECEGLALWDETESSTLYSSWERFLILQ
NTSGLCTVRSTAVSFHSLGRNDFAAKFETYINTLTDAIQLQLVSSLGVTPEFSLLFFNPE
ARLNISITGGSCFLDTLVNDTHIVEVIQQIPDYDCSQLTLAPKSLGSALVTVQDVGLVPP
LSASSTVQVADMDWIKISTGEHISIEKGSLQSINFLVGVSDGRTFDPSQYIYMKISVHIE
EDIVDVMENNDTPLVGNRYLRGGPTFTLQGTHLGVTTIYLSAVQHSGHEIVSQPIKVEVY
APPTVHPRDIFLVPGASYVLTVRGGPKIGSHVRYSSLDDQTAQIHQFSGKLSAISPGNST
LVATIYGVGDIMLCRAYGIVKVGIPSSAILNVQSEQLAVNCKMPIYPSLSEGNLFSFYEL
CNNFKWTVGDKDVMDFQGAEHAHGRGNRTLKTSLNELDLNFVQVLRGISAGRTKVAVSFS
CKFKNSNSLSKSMFYTASVSVSVVPDLPLALGSPITWILPSYYTSSDLLPLSSHAYSKGV
SLSDKGIAYSLLGPEKGKNDELRGNDLYIDGAKIITKDSDSVACILAKDKTSGRTDVASC
VRVAELDQIRMVDEFHVHMVALDADLALPIRYHDDLGNPFHEAYNIMLFEVETNYPHIVS
IGKYDGHGTINLHAKSEGFALVQVSFVNNPRKAIYAVISVGPQLYPQNPVIHQGASLNFD
IKGLGDSASGQWFSSNESVVSIESLSGKAEATGEGTALVHFEGTSSSFELHTTVRVLKGN
IVSVDAPNEVITNVPIPVEGYAFSVKFNDEVSGRKKLSSFDCAVTPPKIGFARPWKDPYT
GSMHCLFFPHSPQHLARSAANTGGDSPHQVLVFIRASLTDDHQISGSASALFVGGFVLET
DGMNSLHMNLTPDSNKRVITLTGNTNVELSWLDRNNLIVRPIHGGDPAVAKYEISARGPT
RIQDHLVFSLPSTGQRVEVSVSYYPRDRETAMKPANLTFWAGISALLFLLIFTVTFGICY
LDRPARSPPRVAFGSPGIAAPATPKRSSPAVVNEHSPRTPQPFIDYVRSTIDETPYYRQD
FRRRANPQHTY
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgcttctcctcctcttccttctccaccatgcgacgtcgtttccgaccccgggt
ccccacatcaccgacgtcaacatactcctcccgcccaaaatgacctaccccgtcgagtac
aggcttcaggccagcgacggctgcttcaagtggtcgtgggatcatcacgacatactatcg
gtgttgccggagttcaatgcgagcagccgctgctcgactagtgctcggttgaggtcgatt
gcgccctacggtggccgcaaggagactgcggtttacgccactgacttgaacactggaatg
gtgattaggtgcaaggtttatgtggattcaatatctaagattaagatattccataactct
gtcaagcttgatctggatggactcgctactcttcgcgttcgagcatttgactctgaagac
aatgtcttctcctccctggtgggcctgcaattcatgtggcagttgatgcctgaaacccac
gaaatgcctcatagccttgtccatgttcctttgaaggagtctccattgagtgattgcagt
ggcttttgtggcgacttggatattcaaataaaccttgaagaaagtggtgttttttcagac
ttttatgtagtaaagggcactgaaattggccatgagattgtttcggttaatctgctggaa
ccatcagcggggcacttgggggatgaaattgtaataactgttgcagaagcaatgtctcta
gatcccccatcacccgtacatgtccttattggtgctgttgttcgttatactcttaaagtc
atccgtagcaatattccgcatgttgtaagtttaccatctccgttccatcaatggtctgtt
ctgaactcttcagtggctcaagtggatagagctgtgggtacagttcatgcattgaacttg
ggggttacagcagttgctgttgaagatactagggtcgtaggacacatgcaaatatcatct
cttcatgttgtcatacctgataatatgttgttattcatgtcacctctttcttcttgtggt
gatcgtattgaggatattgagcccattccctccgtgtctcgctggtatgtagtggctggc
cgtctatatatgattcttgtaaaggttttctctccaggacctggagcacatgaaatttat
ataacagaaagtgatgaaataaagttgcacagtaaccaagatgaattctggaatattctc
ccacattcagaaggtgctactgctatgagcaattatagaatgttggatgcaaaatcatat
ggtctgggaaagcttactgcaactttggcttatcacactggtcctgaggtaaagaaagaa
gttcttaaggtttttcaagaagtcatggtatgcgatcaaataaaatttattactgaagga
gacaggggtgatgtggacaaaattctcctcccatgggtcactggtgtctatcaggaactg
gagcttaaagcaagtggaggttgctccatgtcctccagtgactataagtggtcttcttca
gacatgtctattgcttctgtatctgtctctgggatcgttcaggcaaaaaagcctgggaag
gcaactattagagcagtgtccatctttgattcattgaattatgatgaggtggttattgaa
gtttccgttccccattcgatggtcttgctgcctaactttccaacggaagcacctgttggc
tcacatgttcaagcgtccgttacattgaaagcgtcaactggtgcatatttctatgcatgt
gatgctttccggtccttcatcagatggaaaactgagagtgactcattcataattgtcaat
acaagtacggaagtatttattccagacataaaagaagctgctgaacgacattcctttcca
tatggtcctccgtgttcatggacaaacatatatgctgcaaattctggtcaaactttggtg
catgcaacattgaccagggatcatcaactatcagaacatgctggtagggattctgttgtc
ttgaaagcatcctcgcctattgctgcatttttaccacttattattcaccaggcaagtgac
gggaaccagtttggtggttattggttcaattgggttcatgctgaatctcaaaatcagctg
ggcagtttggattatctgtatcttgtgcctggtactcacttggatgtaatgcttcatggg
ggaccagaaagatggggcaaggatgtggagtacgttgagaatgttgcagtgatggctgaa
caggatggtcttgtgaaagataagatttcggtccatcaaataccaaccagctatgggaat
ccatacagaatcgggtgtgatagcttgggaacctttagacttgttttcagacgtggaaac
ttaatgggagaagaccatcatttacctgttgtatctgaagtgcagttgttgcttatatgc
aactttccatcatcaattgtaataatagctgatgaagctttgaacacgcctctagctata
cagtctgcagctcgggctgaactgttgccgagcagaatgcgcgccaccccaattaaagta
gccaatggacgtaaaatacgggcatcagctgttggtcttagtgattcgggaaaagctttt
gcaaattcatcttctatctttttgagttgggaattagctgagtgtgaaggactggctctc
tgggatgagactgaaagttcaacattatattccagctgggaaaggtttttgatcttgcag
aatacatctggactctgtactgtgcgttccaccgctgttagctttcactctttgggccgt
aatgattttgctgctaagtttgaaacttatatcaatactcttacagatgcaatccagctg
caactcgtttcgtctcttggagtcactccagaattcagcttgttgtttttcaatcctgaa
gctaggttgaatatctctataactggagggagctgttttcttgacacattggtaaacgat
actcatattgttgaagtaatacaacagatccctgattatgattgttcacaactaacgttg
gctcctaaaagcctaggctctgcacttgtaactgttcaggatgttgggctagttcctcct
ctttctgcatcttcgactgtccaagttgcagacatggactggatcaagatttcaaccgga
gaacatataagcattgagaagggaagtttgcagtctataaactttttggttggggtcagt
gatgggcgtacttttgacccttctcagtacatttacatgaaaataagtgtccacattgaa
gaagatatagttgatgttatggagaataatgacactccattagttggtaatagatactta
cgtggtgggccaactttcacgttgcaaggcacgcatcttggagtgacaacaatatatctt
agtgctgtccaacactctggacatgaaattgttagccagccgattaaggtggaagtatat
gcaccaccaacagtacatccccgtgacatatttcttgtaccaggtgcttcttatgtgctt
acagtcaggggaggccctaaaattggttcacatgttcggtattccagtttggatgatcaa
actgctcaaattcaccagttctcagggaaactatcggcaatttcaccagggaacagtact
cttgttgccacaatttatggtgttggtgatatcatgctttgtcgagcatatggcatagtt
aaagttggaattccttcatcggccattttaaatgtccagagtgaacaacttgctgttaac
tgcaagatgccaatatatccttcactgtcagagggaaatttgttttccttctatgagctc
tgtaacaatttcaagtggactgtgggagacaaagatgttatggattttcaaggggcagag
catgcgcatggtcgaggcaacagaactctgaaaacatccctaaatgagcttgacctcaac
tttgtacaagttcttcgcggaatatcagctggcaggacaaaagttgcagtttcgttctca
tgcaaattcaagaattccaattcgttgtcaaaatcaatgttttacactgcatctgtgtca
gtatcggtggtccctgatcttccccttgctcttggatcaccaataacctggatccttcct
tcttactatacctcttctgatctattacctttatcttcacatgcctacagtaaaggggtt
tctttgagtgataaaggcattgcttattccttgttaggaccggaaaaggggaaaaatgat
gagttacgtggcaatgatttatatattgatggtgctaaaatcataactaaggactcggac
agtgttgcatgcatactagcaaaagacaagacaagtggaagaactgacgttgcatcttgt
gtaagggtggcggagttggatcaaatcagaatggtggatgagtttcatgttcacatggtt
gctttagatgctgatcttgcccttcccatcaggtatcatgacgatcttggaaatcctttc
catgaggcatataacatcatgctgttcgaagtggaaactaactaccctcacattgtatca
attggcaagtatgatggtcatgggactatcaatcttcatgccaaaagtgaaggttttgct
cttgttcaagtgtcttttgtcaataatcctcggaaagcaatatatgctgtgatctctgtt
ggtcctcagctgtatccacagaatcccgtcattcaccagggagcaagtctcaacttcgac
ataaaaggtttaggggattcagcatcagggcagtggttcagttccaatgagagcgttgtg
tctattgaaagtctctctggaaaagctgaagccaccggagaaggtacagccctagttcac
tttgagggtacaagttcgagtttcgagcttcatacaacggtcagagtgttgaaagggaac
atcgtgtctgttgatgctcctaatgaggttatcactaatgtgccaattccagtagaagga
tatgctttctcagtgaagtttaatgatgaagtttctggaagaaagaagctaagctcgttt
gattgtgctgttactccacctaaaatcgggtttgccaggccgtggaaggatccctacact
ggcagcatgcactgcctgttcttcccacactctcctcaacatttagcgcgttcagcagcc
aacacaggaggagattcgccacaccaggtgcttgtttttattcgagcttcgctaacggat
gatcatcaaatttctggctctgcatctgctctcttcgttggaggatttgtccttgaaacc
gatgggatgaactcactgcatatgaacctgactccagactccaacaagcgtgtcataacc
ctaactggtaacaccaacgtcgagctcagttggctcgacaggaacaacctgatcgttaga
cccatccacgggggcgatcctgctgtagcaaagtatgagatcagcgcccgtgggcccacc
agaatccaggatcatcttgttttctcgctgccatcaactggccagagagttgaagtcagc
gttagctactatcctcgtgacagagaaacagccatgaaaccagcaaacctcaccttctgg
gctggtatatctgctctcctctttctactgatattcacagtgacctttggcatatgttac
cttgacagacctgctagatcgccgccgcgagttgccttcggcagcccgggcattgcggcg
cctgccacccccaagcgcagcagtccggccgtggtcaatgagcattcgcctcggacaccg
cagccgttcattgactatgttaggagcaccatagatgaaactccttattacaggcaagac
tttaggaggagggctaatcctcaacacacctactag
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