Streptomyces spinosirectus: LXH13_12395
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Entry
LXH13_12395 CDS
T08958
Name
(GenBank) bifunctional RNase H/acid phosphatase
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn00860
Porphyrin metabolism
sspn01100
Metabolic pathways
sspn01240
Biosynthesis of cofactors
sspn03030
DNA replication
Module
sspn_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LXH13_12395
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LXH13_12395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspn03032
]
LXH13_12395
Enzymes [BR:
sspn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
LXH13_12395
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
LXH13_12395
DNA replication proteins [BR:
sspn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
LXH13_12395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
UIR17788
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Position
complement(2674230..2675390)
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AA seq
386 aa
AA seq
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MREFIVEADGGSRGNPGPAGYGSVVLDATTGETLVEAAEYIGVATNNVAEYRGLLAGLRA
AHQLDPSAIVHVRMDSKLVVEQMSGRWKIKHPDMKPLAMQASQVFPPERVTYEWIPREKN
KHADRLANEAMDAGARGEQWSAADSTAELEAAAAKVEADVRAATVVSKVSSPGWAPADLG
APATFVLLRHGETPLTPQKRFSGSGGTNPSLSEVGREQAERAGAALARRGTIQAVVASPL
ARTRETAEIVARHLGLEVSIEEGLRETDFGAWEGHTFGEVRERYPDDMNRWLADPTAEPT
GGGESFAATGARIEATREKLVAAYAGRTVLLVSHVTPIKTFVQLALGAPPEALFRMELSA
AALSVVAYYADGNASVRLFNDTSHLR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggagttcatcgtcgaggcggacggcgggtcgcgggggaacccggggcccgcgggc
tacggctccgtcgtgctggacgcgacgacgggcgagacgctggtcgaggccgccgagtac
atcggcgtcgccacgaacaacgtcgccgagtaccggggcctgctggccggcctgcgcgcg
gcacaccaactcgacccctcggcgatcgtccacgtccgcatggactccaagctcgtcgtc
gagcagatgtccggccgctggaagatcaagcacccggacatgaagccactggccatgcag
gcgtcccaggtcttcccgccggagcgggtgacgtacgagtggatcccccgcgagaagaac
aagcacgcggaccgactggcgaacgaggcgatggacgcgggcgcgcggggagagcagtgg
tcggcggcggattcgacggcggagctggaggctgccgcggcgaaggtcgaggcggatgtg
cgtgccgcaacggtggtcagcaaggtgagcagtcctggctgggcgcccgccgacctgggt
gcgcccgcgacctttgtgctgctgcggcacggtgagacgccgttgactccgcagaagcgg
ttctccgggagcggggggacgaacccgtccctgtccgaggtcgggcgggagcaggccgag
cgggcgggcgccgcgctggcccggcgtgggacgatccaggcggtcgtcgcgtcgccgctc
gcgcgcacccgtgagaccgccgagatcgtggcccggcacctcggtcttgaggtgagcatc
gaggaagggctgcgcgagacggacttcggggcctgggagggccacaccttcggcgaggtg
cgcgagcgctacccggacgacatgaaccgctggctggccgacccgacggcggagccgacc
ggcggcggggagagcttcgccgcgaccggggcccgtatcgaggccacccgggagaagctg
gtggcggcctacgcgggccgcaccgtcctgctcgtctcgcacgtcaccccgatcaagacg
ttcgtgcaactggccctgggcgccccgcccgaggccctgttccgcatggaactgtcggcg
gccgcgctgtcggtggtggcgtactacgcggacggcaacgcgagcgtgcggctgttcaac
gacacctctcacctgcgctga
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