Streptomyces spinosirectus: LXH13_19245
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Entry
LXH13_19245 CDS
T08958
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LXH13_19245 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_19245 (nth)
Enzymes [BR:
sspn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LXH13_19245 (nth)
DNA repair and recombination proteins [BR:
sspn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LXH13_19245 (nth)
Prokaryotic type
LXH13_19245 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UIR19055
LinkDB
All DBs
Position
complement(4172383..4173324)
Genome browser
AA seq
313 aa
AA seq
DB search
MKKAAAKKTAVKKASSAVKKSAPAKKAPVKKATVAPKKATAAVKGVPAAQPVAKPPTGES
HTALVRRARRINRELADVYPYAHPELDFDNPFQLVIATVLSAQTTDLRVNQTTPALFAKY
PTPEDLAAANPEEVEEILRPTGFFRAKTKSVMGLSKALVEQFGGEVPGRLEDLVKLPGVG
RKTAFVVLGNAFGRPGITVDTHFQRLVRRWQWTDQTDPDKIEAAVGALFPKSDWTDLSHH
VIWHGRRICHARKPACGACPIAPLCPAYGEGETDPEKAKKLLKYEKGGFPGQRLKPPQSY
LDAGGKPAPPLGA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaggccgccgcgaagaagaccgccgtgaaaaaggcttcctccgcagtgaaaaag
tcggcgccggcgaagaaggcacccgtcaagaaagcgaccgtcgcgccgaagaaggcgacc
gccgctgtcaagggtgtccctgccgcgcagcccgtcgccaagccgccgacgggtgagtcg
cacaccgcgctggtccgccgcgcccgccgcatcaaccgcgaactcgccgatgtgtatccg
tacgcccacccggagctggacttcgacaaccccttccagctcgtgatcgccacggtcctg
tcggcgcagaccaccgacctcagggtcaaccagacgacgccggcgctcttcgccaagtac
cccacccccgaggacctggccgccgccaaccccgaggaggtcgaggagatcctccgcccg
accggcttcttccgggccaagaccaagtccgtcatggggctgtcgaaggcgctggtggag
cagttcggcggggaggtccccggccgcctcgaggatctggtcaagctgcccggtgtgggc
cgcaagaccgccttcgtggtgctcggcaacgccttcgggcgccccggcatcacggtggac
acgcacttccagcggctggtgcggcgctggcagtggaccgatcagaccgacccggacaag
atcgaggccgcggtcggcgcgctgttccccaagagcgactggacggacctctcgcaccat
gtgatctggcacggccgccgcatctgccacgcccgcaagcccgcctgcggtgcctgcccc
atcgccccgctctgcccggcgtacggcgagggcgagacggacccggagaaggcgaagaag
ctcctgaagtacgagaagggcggcttccccggccagcgcctgaagcccccgcagtcgtac
ctcgacgcgggcggaaagccggccccgcccctgggcgcctga
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