Mammaliicoccus stepanovicii: SAMEA4384403_1327
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Entry
SAMEA4384403_1327 CDS
T06999
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sste
Mammaliicoccus stepanovicii
Pathway
sste03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4384403_1327 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sste03400
]
SAMEA4384403_1327 (nth)
Enzymes [BR:
sste01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SAMEA4384403_1327 (nth)
DNA repair and recombination proteins [BR:
sste03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMEA4384403_1327 (nth)
Prokaryotic type
SAMEA4384403_1327 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
SNV67682
UniProt:
A0A239Z931
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All DBs
Position
1:1271541..1272206
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AA seq
221 aa
AA seq
DB search
MISKKKALEMLDVIDGMFPDAECELVHENPFELTIAVLLSAQCTDVLVNKVTKSLFNKYN
TPEDYLEVSLEELQEDIRSIGLYRNKAKNIQKLCQSLIENFNGIIPSTHQELESLAGVGR
KTANVVMSVAFGEPSLAVDTHVERVSKRLGICRIKDNVRQVEDRLCSIIPRSRWTKSHHQ
LIFFGRYHCIARKPKCEVCPLLNDCREGQKRLKAGLVKVEA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgataagtaaaaagaaagcattagaaatgctcgacgtaatagatggtatgtttcccgat
gctgaatgtgaacttgttcatgaaaatccttttgaattaaccattgctgtattactttca
gcgcaatgtaccgatgtattagtcaataaagtaacaaaatctttatttaataaatacaat
acaccagaagattatttagaagtcagtttagaagaattacaagaagatataaggtcaatc
ggtttatatcgtaataaagctaagaatattcaaaaattatgccaatcattaattgaaaat
tttaatggcatcataccaagcacacatcaagaattagagtcattagctggagtaggcaga
aaaactgcgaacgttgttatgagcgtggcattcggtgaaccttcactagcagtagatact
catgttgaacgtgtatctaaaagactagggatttgtagaattaaagataatgtaagacaa
gttgaagatagactttgcagcataatcccgagatcccgttggacgaagagtcatcatcaa
ttaatatttttcggtagatatcattgtattgcccgtaagccgaaatgtgaagtttgtcca
ctattaaatgactgtagagaaggtcaaaaaagattaaaagccggacttgtaaaggttgaa
gcataa
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