Solanum stenotomum: 125844140
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Entry
125844140 CDS
T08385
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125844140
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sstn01007
]
125844140
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sstn03016
]
125844140
Enzymes [BR:
sstn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
125844140
Amino acid related enzymes [BR:
sstn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
125844140
Transfer RNA biogenesis [BR:
sstn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125844140
Prokaryotic type
Other AARSs
125844140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
125844140
NCBI-ProteinID:
XP_049379355
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All DBs
Position
11:complement(56322182..56339916)
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AA seq
1182 aa
AA seq
DB search
MEDVCEGKDFSFPNQEEKILQWWEEVKAFETQLEKTKNQPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHEIDEKLQIKTKQQVIEMGIDKYNEE
CRAIVTRYVGEWEKTVVRMGRWIDFQNGYKTMDSKFMESVWWVFAKLFEKGLVYRGFKVM
PYSTGLKTPLSNFEANSNYKEVSDPEIMVSFPIVDDPEGASFVAWTTTPWTLPSNLALCV
NANFVYVKVRNKFNGKIYVVAESRLAELPVEKAKKVAPNGPAADTQIPNSKTKPSGGKSQ
NVETYEVMDKFPGSSLVGKKYIPLFDYFKDFSDSAFRVVADDYVTSDSGTGIVHCAPAFG
EDDYRVCIANNIINKGESLVVAVDDNGRFTDRITDFREKYVKDADNDITQAVKDKGRLVK
SGKFMHSYPFCWRSDTPLIYRAVPSWFIMVEKIKDQLLENNKQTYWVPDFVKEKRFHNWL
ENARDWAVSRSRFWGTPLPVWASEDGEEIVVMDSIDKLEKLSGAKVTDLHRHYIDHITIP
SSRGTEFGVLRRVEDVFDCWFESGSMPYAYIHYPFENVELFENNFPGHFVAEGLDQTRGW
FYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKRLKNYPQPSEVINDYGADALRLYL
INSPVVRAEPLRFKKEGVFAVVKDVFLPWYNAYRFLVQNAKRLEIDGFGPFIPTDQKTLQ
SSSNVLDQWINSATQSLVHFVRQEMDAYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRT
GEGDCRTALSTLYYVLLTACKAMSPLTPFFTEVLYQNLRKVSKGSEESIHYCSYPIVEGQ
RWERIEQSVNRMMTLIDLARNIRERHNKPLKTPLREMVVVHPDSEFLGDIAGKLREYVLE
ELNIKSLVPCNDTLKYASLRAEPDFSVLGKRLGKSMGVVAKEVKAMSTADIIAFEKAGEL
TIASHTLKLTDIKIVRGFKRPDNRKEDEMDAAGDGDVLVILDLRTDDSLFEAGVAREVVN
RIQKLRKKAALEPTDMVEVFFKSLDNDEKVSKQILESQESYIKDAIGSPLLPAELIPSHA
ITIDEESFHGISNLSFVITLARPSLVFNADAITALYGGNTQYCQGLQTYLLMRDHHNLKS
EFQQGKGKINVKCIENQPPVEVILGKHVFLSVGDHFLNSKSH
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgtatgtgaaggcaaagacttctctttcccaaatcaagaagaaaaaatcctt
caatggtgggaagaagtcaaagcattcgaaacccagctcgaaaagaccaaaaatcaaccc
gaatacatcttctacgatggtcctccatttgcaacaggtttacctcattatggccacata
ttagctggtacgatcaaagatattgtgacccgttatcaatcaatgacgggtcatcatgtg
acccgaagatttgggtgggattgtcatggattaccagttgaacatgaaattgatgagaaa
cttcagattaagactaaacaacaagtgattgaaatggggattgataagtacaatgaggaa
tgtagggctattgtgacaaggtatgttggagaatgggaaaaaactgtggtgagaatgggg
agatggattgattttcagaatgggtataagactatggattcgaagtttatggagagtgtt
tggtgggtttttgctaagctgtttgaaaagggtcttgtttatagaggcttcaaggttatg
ccttatagtactggtttgaagactccattatccaattttgaagctaattcaaattacaag
gaagtaagcgaccctgaaatcatggtttcattccctatagttgatgatcctgagggtgca
tcctttgttgcatggactactactccttggacccttccaagtaatcttgctctttgcgtc
aacgccaattttgtatacgtcaaggttcgcaataaattcaacgggaagatctatgtagtg
gcggaatctcgattggctgagctaccagttgagaaggccaaaaaggtcgccccaaatgga
cctgctgctgacactcaaatcccaaattctaagacaaagccttctggtggtaaatcacag
aatgtcgaaacttatgaagtgatggataaatttcctgggtcgtccctagtggggaagaag
tacattccactattcgattacttcaaggatttttctgattcagcattcagagtcgttgca
gatgattatgtgacttctgacagtgggactggaattgttcattgtgctcctgcctttggt
gaggacgattatcgtgtttgtattgcaaacaacataatcaataagggggagagcctggtt
gtggcggtagatgataatggccgctttacggataggattactgatttcagagaaaaatat
gtaaaggatgcagataatgatatcactcaagcagtgaaggataaaggaaggcttgttaaa
tctggaaagttcatgcattcttaccctttttgctggagatctgatacacctctgatttat
agagcagttcctagctggtttattatggttgaaaagattaaggatcaattgctagagaac
aataagcaaacctactgggttcctgattttgtgaaggaaaaacgcttccacaattggtta
gaaaatgcaagagactgggctgttagccgaagtaggttctggggtactcctcttcctgtg
tgggctagtgaggatggtgaggagatagttgttatggattccattgacaaactggaaaag
ctctccggtgctaaggtgacagacttgcatcgtcactacattgatcacataaccatccca
tccagtcgggggactgaatttggcgttcttcgacgtgtggaggatgtatttgattgctgg
tttgagagtgggtcaatgccttatgcttatatccactatccttttgagaatgttgagctc
tttgagaacaatttccctggtcattttgtggcagaaggtctcgatcaaactcgtggatgg
ttctacacccttatggtcctttctaccgccctttttgggaaacctgcttttagaaacctc
atttgcaatggtcttgtcctggctgaggatgggaagaagatgagtaaacgattaaagaac
tatcctcaaccatcagaagttatcaatgattatggagctgatgcattgcgtttatacctg
ataaactcccctgttgtccgtgctgaacctctgcgctttaagaaagagggagtttttgct
gtggtgaaagatgttttcttgccatggtacaatgcatataggttccttgttcagaatgca
aaaagacttgagattgatgggtttggaccattcattcctactgatcagaaaactttgcag
agttcttcgaatgtcttagaccaatggatcaattctgcaactcagagcttagtgcatttc
gtccggcaggaaatggatgcttatagattgtacacggtggttccatatctcctaaaattt
cttgataatttaacaaatatctatgtgcggttcaatcggaagagactaaaaggccgtact
ggtgaaggagactgcagaactgctctttcaactctttactatgtgcttctgactgcttgt
aaagctatgtcaccattaactccatttttcactgaggttctttaccaaaatttgcggaaa
gtttctaaaggatcagaggagagcattcactattgcagctatcctatagtggaagggcag
aggtgggagcgtattgagcagagtgttaataggatgatgacacttattgaccttgcacga
aatattcgtgagcgtcacaacaaacctcttaaaactccactcagggaaatggtggttgta
catccagattcagaattccttggtgatattgcgggcaaactaagagagtatgtgctcgag
gagctaaacattaaatctttggtcccatgcaatgacacattgaagtatgcttctttgcgt
gcagaaccagatttcagtgtgttgggaaaaaggttgggcaagtcgatgggtgttgttgcc
aaagaagttaaggccatgtcaaccgcagatataattgcttttgagaaagcgggagaactt
actattgcttcacacactttgaagcttactgatatcaagattgttaggggtttcaaacgt
cctgataataggaaagaggatgaaatggatgcagcaggggatggtgatgttttagtgata
ctggatttgcgtactgatgattcactctttgaggctggagttgctcgagaggttgtgaat
aggatccagaaactgagaaagaaagccgcgcttgaacccactgacatggtagaggtcttc
ttcaagtctttggataatgatgaaaaagtctctaagcagattttggagtctcaggaatca
tatattaaagatgccattggatctcctttgcttcctgctgaactgatcccatcacatgca
ataactattgacgaagagagtttccatggaatctcaaacttgtcctttgtgatcacctta
gcaagaccaagtctagtgttcaatgcagatgccatcaccgctttatacggaggaaacaca
cagtattgtcaaggtttacaaacttacctcctgatgagggatcatcataacctgaaatcg
gagtttcaacaaggaaaaggaaagataaatgtaaagtgcattgagaaccagcctccagtc
gaggtgattctgggaaaacatgtcttcttgagtgttggagatcatttcttgaatagtaaa
tcgcactga
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