Solanum stenotomum: 125851891
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Entry
125851891 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125851891
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125851891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125851891
03041 Spliceosome [BR:
sstn03041
]
125851891
03032 DNA replication proteins [BR:
sstn03032
]
125851891
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
125851891
Spliceosome [BR:
sstn03041
]
Complex A
U1 snRNP components
Sm proteins
125851891
U2 snRNP components
125851891
Complex B
U1 snRNP components
125851891
U4/U6.U5 tri-snRNP components
125851891
Complex C
U2 snRNP components
125851891
DNA replication proteins [BR:
sstn03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
125851891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
125851891
NCBI-ProteinID:
XP_049387597
LinkDB
All DBs
Position
1:15673606..15676933
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AA seq
274 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKEE
REDRRTLGLVLIRGEEVISMTVEGPPPPDESRVKGTTAGSAVSGPGIGRAAGRGVPTGPL
VHAQPGLAGPVRGVGGPAPGMMQPQLSRPPMPQVSAPPINYPQQPPPMMRPPGGGPPMPP
QGMQMQRPGGPPPMAPPPHFRPGGGPPQFPPQFGQRPMVPPPPMMRGPPPPRPGMPGQPP
HPGMPPPPPGGQVPVYGPPRPGMPPPPNPQNQQQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcaaagagttccaaaatgcttcaatacatcaattaccgtatgcgtgttaca
atacaagatggtcgtcaattgatcggaaaattcatggctttcgaccgacatatgaacctt
gtgcttggagactgtgaagagttccgtaaacttcctcccacaaaagggtcgaaagaagaa
cgtgaagatcgccgtacacttggtcttgttcttatccgtggcgaggaggttatttccatg
actgttgagggaccacctcctcctgatgaatcacgagtcaagggtactactgccggttct
gcagtttccggccctggaattggtcgggccgctggtcgtggtgttcctactgggccgttg
gttcatgctcaaccgggacttgctggacctgttcgtggggttggtgggcctgctccgggt
atgatgcagcctcaactttctcggcctccgatgcctcaagtttctgctccaccgattaat
tacccacagcagccgccgccaatgatgagaccgccgggtggtgggccaccaatgccaccg
caaggtatgcagatgcaaagacctgggggccctccgcctatggcaccaccaccacatttc
cggcctggtggtggtccaccacagtttccaccgcagtttggtcagcggcccatggttcct
ccacctcccatgatgaggggtccgcctccacctagaccaggaatgcctggtcaaccgcct
cacccgggtatgccacccccacctcccggtggtcaggttcctgtttatggacctcctcgt
cctggtatgcctccaccgcccaatcctcagaaccagcagcaatag
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