Solanum stenotomum: 125854387
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Entry
125854387 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125854387 isoform X1
KO
K12173
BRCA1-A complex subunit BRE
Organism
sstn
Solanum stenotomum
Pathway
sstn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125854387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125854387
03036 Chromosome and associated proteins [BR:
sstn03036
]
125854387
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125854387
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
125854387
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
125854387
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
125854387
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
125854387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
125854387
NCBI-ProteinID:
XP_049389875
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All DBs
Position
2:1206076..1218669
Genome browser
AA seq
378 aa
AA seq
DB search
MAIDVVPPLIAAQLNYLATHAPFSVKVENMCSGGKNTGLLDRFSLVIPFCLDCIKWDVIY
NAVYPLAAPDVIFGAEDETFRPYHSVSDASDSKSLKNPLTDWNNRDMTSLFTLVLQLREL
YKAYQKKRVEQVDDDRLKFEISTMLSREGIEMSLSSNIDKPEEVKFAVPLLDLDLNKMVA
GSTWRHPQKIYLQVIYPVGRKYSSAPTAPRLKLVSSPELKAVFSIDDFRLPAWLDGMCMA
EYLPTLEEMLESQIKDAVASIESRRKLIMALAPLFGRPVEADPLFCRKATFLSSSGVFTF
LVHVAIPLQFPKQQPSLMLQSSQHFNSQGLPIKSPVTTEYPWSPRWETSDMAERIFDFIV
EECLNFKKYCNESMLQNR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgacgtagtccctccactcatcgctgcacagctgaattacctagccactcac
gctccattctctgttaaggtagagaatatgtgttcaggaggcaaaaacactggtttgctc
gatcgattctccttagtaatccccttctgccttgattgcatcaaatgggatgtgatatac
aatgccgtgtatccgttagcagcaccagatgttatatttggggctgaagatgaaacgttt
cgaccttatcattctgtaagtgatgctagtgactcaaagtcattgaagaatcctcttact
gactggaataatagagatatgactagtcttttcactctggtcctgcagctgagggagttg
tacaaggcgtaccaaaagaaaagagttgaacaagttgatgatgacaggttgaagtttgaa
atcagcacaatgctttccagagaggggattgaaatgtctttgagttcaaatattgataag
ccagaagaggttaaatttgctgtcccactgctggatttggatttaaacaaaatggttgcg
ggatccacttggcgtcatccacagaagatatacctacaggttatatatccagttggcagg
aaatactccagtgctcctactgccccacgtttgaaattggtatcttctcctgaattgaag
gctgtcttctcaattgatgatttcaggcttcctgcatggttggatggaatgtgcatggct
gagtaccttccgactttagaagagatgcttgaatcacagattaaagatgcagttgcatcc
attgaaagtagaaggaagctcattatggcattagctcctctttttggaaggccagtggaa
gcagatccacttttctgcaggaaggcgacctttctatcttcctctggggtatttactttt
ctggttcatgttgccatcccacttcagttccctaagcagcagccaagtttgatgcttcag
agttcccagcactttaattctcaaggtctgcccatcaagtctccagtcactactgaatac
ccgtggagtcccagatgggaaacgtcagatatggctgagcggatctttgatttcattgtg
gaagaatgcttgaatttcaagaaatactgcaacgaatccatgcttcaaaatcgatga
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