KEGG   Solanum stenotomum: 125867362
Entry
125867362         CDS       T08385                                 
Name
(RefSeq) GTP-binding nuclear protein Ran1
  KO
K07936  GTP-binding nuclear protein Ran
Organism
sstn  Solanum stenotomum
Pathway
sstn03008  Ribosome biogenesis in eukaryotes
sstn03013  Nucleocytoplasmic transport
sstn03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125867362
   03008 Ribosome biogenesis in eukaryotes
    125867362
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125867362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sstn03019]
    125867362
   03009 Ribosome biogenesis [BR:sstn03009]
    125867362
   03016 Transfer RNA biogenesis [BR:sstn03016]
    125867362
   03036 Chromosome and associated proteins [BR:sstn03036]
    125867362
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sstn04147]
    125867362
   04031 GTP-binding proteins [BR:sstn04031]
    125867362
Messenger RNA biogenesis [BR:sstn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     125867362
Ribosome biogenesis [BR:sstn03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    125867362
  Pre-60S particles
    125867362
Transfer RNA biogenesis [BR:sstn03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    125867362
Chromosome and associated proteins [BR:sstn03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     125867362
   Spindle formation proteins
    125867362
Exosome [BR:sstn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125867362
GTP-binding proteins [BR:sstn04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    125867362
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_22 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 125867362
NCBI-ProteinID: XP_049403789
LinkDB
Position
6:35015033..35018512
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFV
ESPALAPPEVHIDLAAQALHEEELQQAANQPLPDDDDEAFE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctttaccaaaccagcaaactgtagattatccaagcttcaagcttgttattgtgggt
gatggaggaactggaaagacaacatttgtcaaaaggcatctcactggtgaattcgagaaa
aaatatgaacccactattggtgtggaggttcatccactagacttcttcacaaattgtggg
aagattcggttttattgctgggatacagccggacaagagaagtttggaggtctcagagat
ggttactacattcatgggcaatgcgcaattatcatgtttgatgttacagctcgtctgacc
tacaagaatgttcctacatggcatagagatctttgcagggtttgtgaaaacatacccatt
gttctctgtggaaacaaagttgatgtcaagaacaggcaggttaaggctaagcaagttacc
ttccacaggaagaaaaatttgcaatactatgagatctcagcaaagagtaactacaacttt
gagaagccttttctgtaccttgccagaaagcttgctggggatggtaatcttcactttgtg
gaatcacctgcacttgctcccccagaagtacacattgacttagctgcacaggcactgcat
gaagaagagcttcaacaagccgctaatcagccacttccagatgacgatgatgaagcattt
gaatag

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