Solanum stenotomum: 125873345
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Entry
125873345 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase MIEL1 isoform X1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Pathway
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125873345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125873345
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125873345
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125873345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
125873345
NCBI-ProteinID:
XP_049410213
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All DBs
Position
8:162435..170807
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AA seq
281 aa
AA seq
DB search
MEEDGDNFVVDQPPPPTEEELHRQDVGKLLYGCDHYRRRCKLRAPCCNEIFTCRHCHNEA
KNALTNPKERHELVRHNVKQVVCAVCDTEQQVAEICSECGVKFGEYYCEICRFYDDNRTK
GQFHCDDCGICRVGGRENFFHCKKCGSCYSVELRDNHLCVENSMKNHCPICYEFLFDSVK
GTTIMKCGHTMHMECHTEMIHQNQYRCPICSKSVLNMSGTWQRLDMEIEATAMPEEYRYE
VPILCNDCNSTGKAFFHILGHKCKHCNSYNTRMIGTGEDPQ
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacggtgacaattttgtcgttgatcaaccgccgccgccgaccgaagaggag
ctccatagacaagatgtcggaaagttgctttatggatgtgatcattatcggcgacgctgt
aaactccgagccccttgttgcaatgaaattttcacttgccgtcattgccacaacgaggcc
aagaatgctttgaccaatcccaaggaacggcacgaacttgtgcgccacaatgttaagcaa
gttgtttgtgctgtatgcgacaccgaacaacaggttgctgagatctgttcagagtgtgga
gtcaaatttggggagtactattgtgaaatttgtagattttacgatgacaatagaacaaag
gggcagtttcactgtgatgactgtggaatttgcagggtcggtggtcgagaaaacttcttc
cactgcaagaagtgtggatcctgctattcggtggagctgcgtgataatcacttatgtgtg
gagaactcaatgaagaaccattgtcccatctgttatgagtttcttttcgactcagtgaaa
ggcaccacaattatgaagtgtggacatacaatgcatatggaatgccacacagagatgatc
catcagaaccagtatcgctgccctatatgctctaagtctgttctcaacatgtccggaact
tggcaaagattagatatggagattgaagctacagccatgcctgaagaatatcgttatgag
gttccaattctgtgcaatgactgcaatagtactggtaaagcattttttcacatacttggg
cacaaatgcaagcattgtaattcatacaacacccgcatgattggtactggcgaagatccc
caatga
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