Solanum stenotomum: 125874440
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Entry
125874440 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase MIEL1 isoform X1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Pathway
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125874440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125874440
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125874440
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125874440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125874440
NCBI-ProteinID:
XP_049411289
LinkDB
All DBs
Position
8:complement(17977007..17981559)
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AA seq
267 aa
AA seq
DB search
MEGSCNERLYFGKMGYGCEHYRRRCRIRAPCCNEVFDCRHCHNEATSLLRNIYDRHELVR
HDVKQVICSVCDTEQPVAHVCTNCGVNMGEYFCEVCKFYDDDTDKEQFHCDDCGICRVGG
RQNFFHCKKCGSCYSVNLRNNHSCVENSMRHHCPICYEYLFDSLKDTTVMKCGHTMHTEC
YHEMIKRDKCCCPICSKSIIDMSRVWRRMDEEIEETVMPEDLRDKKVWILCNDCNDTTEV
SFHIIGQKCRHCESYNTRMIASPVLPQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctcctgcaatgaacgcctttattttggcaaaatgggttatggatgtgagcac
tataggagaagatgcaggattagggcgccttgctgtaatgaggtctttgattgtcgtcat
tgtcacaatgaagcaacgagcttgttgcgcaatatatatgatcggcatgaactggttcga
catgatgtaaagcaggtcatttgctcagtttgtgatacagaacagccggttgctcatgtt
tgtacaaattgtggtgtaaatatgggagaatacttttgtgaagtgtgcaaattctatgac
gatgatacagacaaagagcagtttcattgtgatgattgtggaatctgcagagtcggtggc
cgtcagaacttttttcactgcaagaagtgtggctcttgctattcagttaatttacgtaat
aaccactcgtgtgtggagaactccatgcggcatcattgtcccatttgttatgagtatctc
tttgattctcttaaagacacaacagtaatgaaatgtgggcacacaatgcacactgagtgc
taccacgagatgataaagcgtgacaaatgctgctgtcccatatgttccaaatcaatcata
gatatgtcgagagtttggagaagaatggatgaggagattgaagagacagtcatgcctgaa
gatctcagagacaagaaggtttggattctatgtaatgactgtaatgatacaaccgaagta
tccttccacattatcgggcagaaatgccgacactgtgaatcatacaacacccgcatgatt
gcatctccagttcttcctcaataa
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