Solanum stenotomum: 125876179
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Entry
125876179 CDS
T08385
Name
(RefSeq) transcription factor PIF4-like
KO
K16189
phytochrome-interacting factor
Organism
sstn
Solanum stenotomum
Pathway
sstn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125876179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125876179
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
125876179
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
125876179
NCBI-ProteinID:
XP_049413252
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Position
9:complement(12266172..12269859)
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AA seq
517 aa
AA seq
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MNPCLPEWNIETELPVPHQKKPMGFDHELVELLWRNGEVVLHSQTHKKQPGYDPNECRQF
NKHDQPTIRVAGNQTNLIQDDETVSWLNCPIDDSFDKEFCSPFLSDISTNPHLGEEPDKS
IRQSEDNNKVFKLDPLEINHVLLQSHHSGFNPNPMPPPRFHNFGSAQQKHHIVGGNQKGV
NFPPPIRSSNVQLGGKEDRSNLMLLDIKEGSVMTVGSSHCGSNQVDTSRFSSSANRGLSA
AMITDYTGKISPQSDTMDRDTFEPANTSSSSGRSGSSYARACNQSTATNSQGHKRKGRDG
EEPECQSKADELESAGGNKSAQKSGTARRSRAAEVHNLSERRRRDRINEKMKALQELLPH
STKTDKASMLDEAIEYLKSLQMQLQMMWMGSGMASMMFPGVQHYMSRMGMGMGPPSVPSM
HNAMHLARLPLVDPSIPLTQAAPNNQAAVMCQNSMLNQVNYQRHLQNPNFPDQYASYMGF
HPLQGTSQPINIFGLGSHTAQRSQQLPHPTNSNAPAT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatgtcttcctgaatggaatattgagactgaacttcctgttccacatcaaaag
aagcctatgggatttgatcatgagctagtggagttgttgtggcgaaacggggaggtagta
ttacatagccaaacacataaaaagcagccaggctatgatcctaatgaatgcagacagttc
aacaaacatgatcaaccaacaataagagttgctggaaatcagactaatttgattcaagat
gatgaaactgtctcgtggctaaactgccctatcgatgattcgtttgacaaagaattttgt
tcccctttcttatctgatatttcaacaaatcctcacctaggggaggaacctgataagtca
attaggcaatcagaggacaataataaggttttcaagcttgatcctttagagatcaaccat
gttcttctgcaatcacatcattctggtttcaatccaaatccaatgccacctccaagattt
cacaactttggatcagcacaacagaaacatcatatagtaggggggaatcagaaaggtgtt
aactttcctccaccgataaggtcatccaatgtgcagcttggtggcaaagaagatagaagc
aatctgatgctgctagatatcaaagaggggtctgtgatgacagttggttcaagccactgt
ggcagcaatcaagttgatactagccggttttcaagtagtgcaaatagagggttgtctgca
gcaatgatcactgattataccggaaaaatcagtccacaaagtgatacaatggaccgagac
acatttgaaccagctaatacatcttcgtcttcaggaagatcgggtagtagttatgcaaga
gcatgcaatcaatctacagcgaccaatagccagggccacaaaaggaagggtagagacggt
gaagaaccagaatgccagagtaaagctgatgagctagaatcagctggaggaaacaagtca
gcccaaaaatctggaactgcccgaaggagccgtgctgcagaagtgcataatctctctgaa
aggagacggagggacagaatcaatgagaaaatgaaggccttgcaagagcttcttcctcac
tctactaagacagacaaagcatcaatgttggatgaggctattgaatacttgaagtcactt
cagatgcaactgcagatgatgtggatgggaagtggcatggcatcaatgatgtttcctggt
gtccaacactacatgtcaagaatgggaatggggatgggtccgccttcggtgccttccatg
cacaatgctatgcatttagctaggcttcctttggttgatccatcaatccctttgacacaa
gctgctcctaataatcaagcagctgtaatgtgccagaattcaatgttgaatcaagttaac
tatcaacgccatttgcagaatcccaattttccagatcaatatgctagttacatggggttc
catccacttcaaggcacttctcagcctataaacatttttggcttaggttcacatacagca
cagcgaagtcaacagttaccgcatccaactaatagtaatgcacccgccacttga
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