Shinella sumterensis: Q9314_12770
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Entry
Q9314_12770 CDS
T09417
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ssum
Shinella sumterensis
Pathway
ssum00020
Citrate cycle (TCA cycle)
ssum00785
Lipoic acid metabolism
ssum01100
Metabolic pathways
ssum01110
Biosynthesis of secondary metabolites
ssum01120
Microbial metabolism in diverse environments
ssum01200
Carbon metabolism
ssum01210
2-Oxocarboxylic acid metabolism
Module
ssum_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssum_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Q9314_12770
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Q9314_12770
Enzymes [BR:
ssum01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Q9314_12770
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
SHOCT
Motif
Other DBs
NCBI-ProteinID:
WLS07068
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All DBs
Position
2550143..2553139
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AA seq
998 aa
AA seq
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MARQDANEQFLATSFLDGANAAYIEQLYAQYEANPASVGEEWQAFFKALEDQPSDVVKAA
KGASWKRANWPIAANGELVSALDGNWGVVEKVLEKKVQAKAEAAAAQTGTPVNQADVNQA
TRDSVRAIMMIRAYRARGHLHAKLDPLAIAAPVEDYHELSPSNYGFEEKDLDRKIFIDNV
LGLEYATVREMVEILERTYCSTIGVEFMHISNPEEKGWIQERIEGPDKGVDFTPEGKKAI
LQKLIEAEGFEQFIDVKYKGTKRFGLDGGEALIPALEQIIKRGGQLGLKEIVLGMAHRGR
LNVLTNVMAKPHRAVFHEFKGGSYAPDDVEGSGDVKYHLGASSDREFDGNKVHLSLTANP
SHLEIVNPVVMGKARAKQDQMATVFEGDIIPLRERAKVMPLLLHGDAAFAGQGVVAEILG
LSGLRGHRVAGTVHVIINNQIGFTTNPAFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVTY
AAKVATEFRMKFHKPVVLDIFCYRRFGHNEGDEPAFTQPKMYKAIRAHKTVVSLYGARLI
AEGVISEGEFEKMKADWRANLEQEFEAGQSYKPNKADWLDGAWSGLRSADNQDEQRRGKT
SVPMKQLKEIGRKIATIPEGFKAHKTIQRFMDNRMQMIETGEGIDWAMGEALAFGTLCVE
GTKIRLSGQDCERGTFSQRHSVLYDQETEDRYIPLANLSPTQARYEVINSMLSEEAVLGF
EYGYSLARPNALTLWEAQFGDFANGAQVIFDQFISSGERKWLRMSGLVCLLPHGYEGQGP
EHSSARLERFLQLCAEDNMQVANVTTPANYFHILRRQVKRDFRKPLIMMTPKSLLRHKRA
VSSLSEMAGETSFHRLLWDDAEVIKDGPIKLQKDAKIRRVVMCSGKVYYDLLEEREKRGI
DDVYLLRLEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWAFIDPYLEWVLAHIDA
KYQRVRYTGRPAAASPATGLMSKHLAQLAAFLEDALGG
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcaagacgccaacgaacaattcctggccacttccttcctcgacggagcgaac
gcggcctatatcgagcagctctatgcccagtacgaggcgaaccccgcctccgtcggcgag
gaatggcaggccttcttcaaggcactcgaagaccagccttccgatgtcgtgaaggccgcc
aagggtgcttcgtggaagcgcgcgaactggccgatcgccgccaatggcgaactcgtctcg
gcgctcgacggcaattggggcgtggtcgaaaaggtcctggaaaagaaggtgcaggcgaag
gctgaggctgccgccgcacagaccggcacgcccgtcaaccaggccgatgtcaaccaggcg
acacgcgacagcgtgcgcgccatcatgatgatccgcgcgtaccgcgcccgcggccacctg
cacgccaagctcgacccgctcgccatcgcggcacccgtcgaggactatcacgagctttcg
ccttcgaattacgggttcgaggagaaggatctcgaccgcaagatcttcatcgataacgtg
ctcggcctcgaatacgccaccgtgcgcgaaatggtcgaaatcctcgagcgcacctactgc
tcgacgatcggcgtcgaattcatgcacatctccaacccggaggaaaagggctggatccag
gagcgcatcgaaggcccggacaagggcgtcgacttcacgcccgagggcaagaaggcgatc
ctccagaagctgatcgaggccgagggtttcgagcagttcatcgacgtcaagtacaagggc
accaagcgtttcggcctggatggcggcgaagcgctgatcccggcgctggagcagatcatc
aagcgcggcggccagctgggcctcaaggaaatcgtgctcggcatggcccaccgcggacgc
ctgaacgttctcaccaacgtgatggccaagccccaccgcgccgtgttccacgagttcaag
ggcggctcctacgcgcctgacgacgtcgaaggttccggcgacgtgaagtaccatctcggc
gcctcctcggaccgcgagttcgacggcaacaaggtgcacctgtcgctgacggccaacccc
tcgcatctcgagatcgtcaaccctgtcgtgatgggcaaggcccgcgccaagcaggaccag
atggcgacggtgttcgaaggcgatatcattccgctgcgcgaacgcgcgaaggtgatgccg
ctcctgctgcacggcgatgcggcctttgcaggccagggcgtcgtggccgaaatcctcggc
ctgtccggcctgcgcggccatcgcgtcgccggcacggtccacgtcatcatcaacaaccag
atcggcttcaccacgaacccggccttctcgcgctcttcgccctatccgtctgacgtggcc
aagatgatcgaggcgccgatcttccatgtgaacggcgatgatccggaggcggtgacctat
gccgccaaggtcgcgaccgaattccgcatgaagttccacaagccggtcgtgctggatatc
ttctgctaccgccgcttcggccacaacgaaggcgacgagccggcgttcacgcagccgaag
atgtacaaggcgatccgcgcccacaagaccgtggtcagcctttatggcgcgcggctcatt
gccgaaggcgtcatctccgaaggcgaattcgagaagatgaaggccgactggcgcgccaat
ctcgaacaggagttcgaggccggccaatcctacaagccgaacaaggccgactggctcgac
ggtgcatggtcgggcctgcgctcggccgacaaccaggacgaacagcgccgcggcaaaacc
tcggtgccgatgaagcagctcaaggaaatcggccgcaagatcgcgacgatcccggaaggc
ttcaaggctcacaagaccatccagcggttcatggacaaccgcatgcagatgatcgagacg
ggcgagggcatcgactgggcgatgggcgaggctctggctttcggcacgctgtgcgtggaa
ggcaccaagatccgcctgtccggccaggattgcgagcgcggcacgttctcgcagcgtcac
tcggttctctacgatcaggaaaccgaagaccgctacattccgctcgccaacctgtcgccc
acgcaggcgcgctacgaggtcatcaactcgatgctctcggaagaagccgtgctcggcttc
gaatacggctattcgctggcccgtccgaacgcgctcaccctttgggaggcccagttcggc
gacttcgccaatggtgcacaggtcatcttcgaccagttcatctcgtcgggcgaacgcaag
tggttgcgcatgtcgggcctcgtctgccttctgccgcatggctatgagggccagggtccg
gagcattcctccgcccgtcttgagcgcttcctgcagctctgcgcggaagacaacatgcag
gtcgccaacgtcacgacgccggcgaactatttccacatcctgcgtcgccaggtgaagcgc
gatttccgcaagccgctcatcatgatgacgccgaagtcgctgctgcgccacaagcgggcc
gtctcgtcgctgtcggaaatggcgggggaaacctcgttccatcgtctgctgtgggacgac
gccgaggtgatcaaggacggtccgatcaagctccagaaggacgccaagatccgccgtgtc
gtgatgtgctcgggcaaggtctactacgacctgctggaagaacgcgaaaagcgcggcatc
gacgatgtctacctgctgcgcctggaacagctctatccgttcccggccaaggcgctgatc
aacgagctttcgcgcttccgcaacgccgagatggtctggtgccaggaagagcccaagaac
atgggcgcctgggcgttcatcgatccctatctcgaatgggtgctcgcccatatcgacgcc
aagtaccagcgtgtgcgctacaccggccgtccggctgccgcatcgccggcaacgggcctg
atgtcgaagcacctcgcgcagctcgccgccttcctcgaggacgcgctgggcggttga
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