Simiaoa sunii: H9Q77_08905
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Entry
H9Q77_08905 CDS
T08120
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ssun
Simiaoa sunii
Pathway
ssun03030
DNA replication
ssun03410
Base excision repair
ssun03420
Nucleotide excision repair
ssun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9Q77_08905 (ligA)
03410 Base excision repair
H9Q77_08905 (ligA)
03420 Nucleotide excision repair
H9Q77_08905 (ligA)
03430 Mismatch repair
H9Q77_08905 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssun03032
]
H9Q77_08905 (ligA)
03400 DNA repair and recombination proteins [BR:
ssun03400
]
H9Q77_08905 (ligA)
Enzymes [BR:
ssun01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
H9Q77_08905 (ligA)
DNA replication proteins [BR:
ssun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H9Q77_08905 (ligA)
DNA repair and recombination proteins [BR:
ssun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
H9Q77_08905 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9Q77_08905 (ligA)
MMR (mismatch excision repair)
DNA ligase
H9Q77_08905 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H9Q77_08905 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
Nlig-Ia
HHH
HHH_3
Lar_restr_allev
HTH_Card1
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
QNM01256
UniProt:
A0A7G9FRS4
LinkDB
All DBs
Position
complement(1928661..1930634)
Genome browser
AA seq
657 aa
AA seq
DB search
MQSSKIDRIKYLVEQLNAASESYYAKDREIMSNYEYDKLYDELVELEKETGVTLANSPTV
NVGYEAVDELPKERHESPMLSLGKTKSREELREWLQGNPAILSWKLDGLTIVLTYREGKL
AKAVTRGNGEIGEVITNNARTFKNLPLNISYTGELILRGEAVITYSDFEKINGEIADAEA
KYKNPRNLCSGSVRQLNNEITAKRNVRFYAFTLVKADDVDFHDSKEAQFAFLQEQGFAVV
EHVAVTEENILSVIEDFEHKIEHYDIPSDGLVLTYESISYGQSLGRTAKFPRDSIAFKWA
DELRETTLKEIEWSASRTGLINPVAIFEPVELEGTTVSRASVHNISILRSLRLGIGDHIT
VYKANMIIPQIAENLTGSDNVEIPKVCPVCGQPTEIRQMNEVQTLYCTNEKCPAKEIKAY
TLFVSRDALNIDGLSEATLEKMIDQGFIHEYADLFRLDRYKEVITQMEGFGEKSYQNMID
SIEAARHTTLPRLIYGLGIAGIGVANAKVLCRYFDYDLEKMQSADTETLSAIPGVGEVLA
GAFTEYMSDAENLEQIEHLKQFLTIETPKVDENAQTLSGMSFVVTGSLNHYASRNDLKEV
IEERGGKVTGSVTGKTTCLINNDITSTSSKNKKAKELQVPILTEEDFLKTYNIPYEE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttccaagatagaccggatcaaatatctggtagaacaactgaatgcggcttcg
gagagctattatgccaaagatcgggagatcatgagcaattatgaatatgataagctctat
gatgaactggtggaactggaaaaagagacaggtgttaccctggcgaacagccccacggtg
aatgtgggctacgaagcggtggatgagcttcccaaggaacgtcacgagagtcctatgctg
tctctgggcaagaccaaaagccgggaagaactgcgggagtggctgcagggcaaccctgca
attttaagctggaaactggacggactgaccattgtgttgacctatcgtgaaggaaaactt
gcaaaagcggttacccggggaaacggtgagatcggggaagttatcacgaataacgctcgt
acttttaagaatcttccgttaaatatttcttataccggggaattgatcctgcggggcgag
gcggttatcacttacagtgatttcgagaagatcaacggtgagatcgcagatgcagaggca
aaatataagaatcccagaaatctgtgtagtggatccgttcgacagctgaataatgagatc
acggcaaaacgcaacgtgagattttatgcgtttaccctcgtaaaagcggacgatgtggac
ttccacgattccaaggaagcacagtttgcctttttacaggagcagggatttgcggtggta
gaacatgtggcggtgaccgaggaaaatatcctgtcagtcatcgaagattttgaacacaag
atcgagcattatgacattccctccgacggactggtacttacctatgaaagcatcagctat
ggacagtccctgggcagaactgcaaaattccccagagattccattgcttttaaatgggcg
gatgaacttcgcgagaccactttaaaagagatcgaatggagtgccagccgcaccggcctg
atcaatccggtagccatcttcgagccggtagagctggagggtaccacagtcagccgtgcc
tcggtgcataatatcagcatattacgttcccttcgactggggatcggagatcacattaca
gtctataaggcgaatatgatcatcccccagatcgcagagaatctgaccggcagtgacaac
gtggagatcccgaaggtctgccctgtctgcggacaacctaccgagatccgtcagatgaat
gaagtacagaccttgtattgcaccaatgagaaatgcccggcgaaggagattaaggcatac
accttattcgtcagccgtgatgccctgaatatcgacgggctctccgaagctacattggag
aaaatgatcgatcagggcttcatccacgaatatgctgacctgttccggctagatcgttat
aaggaagttatcacacagatggagggcttcggagagaagtcttatcagaatatgatagac
agcattgaagctgcgcgccatacgacgctgccccgactgatctacggactgggaatcgcg
gggatcggtgtggccaatgccaaggtgctctgcagatattttgattatgatctggagaaa
atgcagtcagcagacacagagaccttaagtgctatccccggtgtgggagaagtgcttgcc
ggggcatttacggagtatatgtccgatgcggagaacctggaacagatcgaacatctgaaa
cagttcctgaccattgagacacctaaggtggatgaaaatgcacagacactatccggtatg
agtttcgttgtaaccggaagtctgaaccattatgccagtcgtaacgacttgaaagaagtc
atcgaggagagaggcggtaaagtcaccggcagtgtgacggggaagaccacctgcctgatc
aacaatgatattacctcgacttcttccaaaaataaaaaagccaaggagcttcaggttccg
atcctgacagaggaggatttcctgaagacttataatattccttacgaggaataa
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integrated database retrieval system
