Sphingobium sp. SYK-6: SLG_03800
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Entry
SLG_03800 CDS
T01622
Name
(GenBank) efflux pump periplasmic linker protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy01501
beta-Lactam resistance
ssy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SLG_03800
01503 Cationic antimicrobial peptide (CAMP) resistance
SLG_03800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssy03036
]
SLG_03800
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_03800
01504 Antimicrobial resistance genes [BR:
ssy01504
]
SLG_03800
Chromosome and associated proteins [BR:
ssy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SLG_03800
Transporters [BR:
ssy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SLG_03800
Antimicrobial resistance genes [BR:
ssy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SLG_03800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
YknX_C
Beta-barrel_RND_2
HH_CzcB
HH_YBHG
HH_EMRA
VWA_3_C
Motif
Other DBs
NCBI-ProteinID:
BAK65055
LinkDB
All DBs
Position
complement(389459..390613)
Genome browser
AA seq
384 aa
AA seq
DB search
MAITLSSALLVALSACGSGGKQQQPGAGGPGQKTVGFVVVQPQDVPLETVLAGRVNAYLT
SEVRPQISGVILRRLFTEGALVRAGEPLYQIDPAPYRATAAEAQANLASAQASAQAARAL
AERYKPLVVIQAISEQDYTNAVAAAEQAEAAVAQRRAALETARINLRFTTVPAPISGRIG
RSLVTPGGLATSNQATALAVINQLDPIFVDIQQSAGNLLALRRLLARGGASPSSADVRLL
LEDGSEYEGVGRVQFSETLVDPATGTVTLRARFSNPDGLLLPGMFVRARFAQAVDRGAFL
VPQAAVTRDGKGGARLFIAGRDNKAEARSVQAPRTLGANWVVTDGLKAGDRVIVQGTGDL
RPGQDIRAVPADAPQPVAPARAGG
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcactctgtcgagcgccttgctggtcgcgctgtcggcctgcggcagcggcggc
aagcaacagcaacccggcgccggtggcccgggccagaagactgtcggtttcgtggtcgtc
cagccgcaggatgtaccgctcgagaccgtgctggcggggcgcgtgaacgcctatctcacc
tcggaagtgcggccgcagatctccggcgtgatcctgcgccgcctcttcaccgagggcgcg
ctcgtgcgcgcgggcgagccgctctaccagatcgatcccgcgccctatcgcgccacggca
gccgaagcgcaggccaatctggcgagcgcgcaagcgagcgcacaagcggcacgcgcactt
gcggagcgctacaagccgctggtcgtgatccaggcgatcagcgagcaggactataccaat
gccgtcgccgcggccgagcaggccgaagcggccgtggcgcagcggcgggcggcgctggag
acggcgcgcatcaatctgcgcttcaccaccgtgcctgcccccatcagtggccggatcggc
cgttcgctggtcacgcccggcgggctcgccaccagcaatcaggccactgcgctggcggtc
atcaaccagctcgatccgatcttcgtggatatccagcagagcgccggcaatctgctcgcg
ctgcggcggctgctggcgcgcggcggcgcctcgccctcctcggcggacgtgcgcctcctg
ctggaggacggcagcgaatatgaaggcgtcggacgcgtccagttctccgagacgcttgtc
gatcccgccaccggcacggtgacgctgcgcgcgcgcttctccaatcccgatggcctgctg
ctgcccggcatgttcgtgcgggcgcgcttcgcccaggccgtggatcgcggcgccttcctc
gtgccgcaggcggccgtcacgcgggacggcaagggcggcgcccgcctgttcatcgccggg
cgggacaacaaggccgaggcgcgctcggtgcaggcgccacgcacgctcggcgccaactgg
gtcgtcacggacggcctgaaggccggcgaccgcgtgatcgtgcagggcaccggcgacctg
cgccccgggcaggatatccgggccgtgccggcggatgccccgcaaccggtggcgcccgcg
cgcgccgggggctga
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