Sphingobium sp. SYK-6: SLG_04960
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Entry
SLG_04960 CDS
T01622
Name
(GenBank) efflux pump periplasmic linker protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy01501
beta-Lactam resistance
ssy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SLG_04960
01503 Cationic antimicrobial peptide (CAMP) resistance
SLG_04960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssy03036
]
SLG_04960
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_04960
01504 Antimicrobial resistance genes [BR:
ssy01504
]
SLG_04960
Chromosome and associated proteins [BR:
ssy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SLG_04960
Transporters [BR:
ssy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SLG_04960
Antimicrobial resistance genes [BR:
ssy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SLG_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
BAK65171
UniProt:
G2ILA8
LinkDB
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Position
519964..521139
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AA seq
391 aa
AA seq
DB search
MNYETNMKYEAMLGDEIDAETARKRRRMLLFVGLGVLLALAVFIGYRMFAGSGDQGETAN
QVPLVTVAVPGQEAVTRMANATGTLAARVDMPVGVVGEGGRILAVHVQPGDRVGAGQILA
SIERSVQAEQIAQLAASVDVAKADAKLAQNNLDRARALLSDGFVSQADIDQRVATRDAAV
ARVNVAAAQLNSMRAQVGRLDIRAPAAGIVLTRDVEPGQVVSGGSGVLFRIARGGEMELR
ALLSEDELARLKIGTVANVTPVGFERSFEGHVWQVSPVIDQSTRQGIARIALPYDPALRP
GGFAHAQIAMERLDAAVLPESAVQSDQKGSFVYIVGKDNKIERRDVRTGAVTAAGIAITQ
GLKGGEKVVLYASGFLNPGETVNPRIEKKSS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgaaaccaacatgaaatacgaggccatgctgggggacgaaatcgacgcggag
acggcccgcaagcggcgcaggatgctccttttcgttggccttggggtgctgctcgcgctc
gcggtcttcattggctatcgcatgtttgccggttccggcgaccagggtgagacggccaat
caggtcccgctggtcacggtcgccgtgccggggcaggaagctgtcacccgcatggcgaat
gccaccggcacgctcgcggcgcgcgtcgacatgcccgtgggcgtggtgggcgagggcggt
cgcatcctcgcggtccatgtccagccgggcgatcgcgttggggccggccagatcctcgcc
tcgatcgagcgttcggtccaggccgagcagatcgcgcagctggccgccagcgtggacgtg
gcgaaggctgatgccaagctcgcccagaacaatctcgatcgtgcccgcgccctgctttcg
gacggcttcgtctcgcaggccgatatcgatcagcgcgtcgcgacgcgggatgccgccgtg
gcgcgggtcaatgtcgcggctgcccagctcaattccatgcgcgcgcaggtcggccggctc
gatatccgtgcccccgccgccggcatcgtgctcacccgtgatgtcgagcccggccaggtg
gtcagcggcggcagcggtgtgctgttccgcatcgcccgtggcggcgagatggaactgcgc
gccctgctttcggaagacgaacttgcccgcctgaagatcggcacggtcgcgaatgtgacg
cccgtcggcttcgagcgcagcttcgagggccatgtctggcaggtgtcgccggtgatcgac
cagtcgacccggcagggcatcgcgcgcatcgcgctgccttatgatcccgccctgcgcccc
ggcggcttcgcccacgcgcagatcgcgatggagcggctggatgctgcggtgctgccggaa
tcggcggtgcagagcgaccagaagggcagcttcgtctacatcgtgggcaaggacaacaag
atcgagcgccgcgacgtgcggaccggtgcggtcaccgctgccggcatcgcgatcacgcag
ggtctcaagggtggcgagaaggtggtgctctatgcgagcggcttcctcaaccccggcgag
acggtgaatccgcgaatcgagaagaagagcagctaa
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