Sphingobium sp. SYK-6: SLG_18270
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Entry
SLG_18270 CDS
T01622
Name
(GenBank) efflux pump periplasmic linker protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy01501
beta-Lactam resistance
ssy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SLG_18270
01503 Cationic antimicrobial peptide (CAMP) resistance
SLG_18270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssy03036
]
SLG_18270
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_18270
01504 Antimicrobial resistance genes [BR:
ssy01504
]
SLG_18270
Chromosome and associated proteins [BR:
ssy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SLG_18270
Transporters [BR:
ssy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SLG_18270
Antimicrobial resistance genes [BR:
ssy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SLG_18270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
BSH_RND
Beta-barrel_RND_2
YknX_C
CzcB_C
RND-MFP_C
BSH_CusB
HH_MFP_RND
Beta-barrel_RND
DUF6280
Motif
Other DBs
NCBI-ProteinID:
BAK66502
LinkDB
All DBs
Position
complement(2004702..2005826)
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AA seq
374 aa
AA seq
DB search
MALTGAAVLLVIAAAGIAARQFGATEQRADVERAALPAVALVKPQPGKDAGQIVLPGVLE
ANNYAALYPRVDGYVRSWSADIGESVKAGQVLARIDAPEIAQALAEAKAGHRTALANQEL
AKTTAQRWTSMRKDGWVSAQALDEKSGDLAAKAAIAEAASASVHRLEALQRFTNIVAPFD
GVVTSRSIEVGALARSSGAVDGPFYTIADVTRMRVFVQLPQSYSGAVHPGLKARMTLPEY
PGETFEAVLVRSANAVDRRSGSVRIEFQAGNPKRALKPGAYAEVTIPVQNRTSTVRVPGS
ALIFGASGPHVAVVERGDRVRMKPVTLGRDDGQMVEIVAGLTRNEQVVDSPPEILETGDR
VRVARSASAEAPAP
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaccggcgcggcggtcctgctggtcatcgcagcggcgggtatcgcagcgcgg
caattcggcgcgacggagcagcgggccgatgtcgagcgggccgcgttgccggcggtcgcg
ctggtgaagccgcaacccggaaaagatgccggccagatcgttcttcccggcgtcctcgaa
gccaataattatgcggccctttatccccgggtggatggctatgtccgttcatggtccgcc
gacatcggcgaaagcgtgaaggcaggccaggtgctggcgcggatcgacgcgcccgaaatc
gcccaggcgcttgccgaggccaaagccggccatcggacggcgcttgccaatcaggaactg
gccaagacgaccgcgcagcgctggacttccatgcgcaaggatggctgggtctccgcgcaa
gcgctcgacgagaagagcggcgatctcgcggccaaggcggcgatcgccgaagccgcgagc
gccagcgtgcatcgcctcgaagccctgcagcgcttcaccaatatcgtcgcaccctttgat
ggcgtggtgacgagccgctccatcgaggtcggggctctggcacgatcgagtggcgccgtg
gacgggcctttctatacgatcgcggacgtgacgcgcatgcgcgtcttcgtccagcttccg
cagagctacagcggggctgtccatccgggcctgaaggcgcgcatgacactgcctgaatat
ccgggcgagacgttcgaggcggtgctggtgcgcagtgccaacgcggtcgatcgccgttcc
ggctcggtccggatcgagttccaggccggcaatccgaagcgagccctcaagccgggcgct
tatgccgaagtcacgatcccggttcaaaaccggaccagtacggttcgggtgccgggcagt
gcccttatcttcggcgccagtggtccgcatgttgcggtcgtcgaacgcggcgaccgggtg
cgaatgaagccggtcacgctgggccgggacgacgggcagatggtcgagatcgtcgcgggg
ctgaccagaaacgaacaggtggtcgattctccgccggagattctcgagacgggggatcgc
gtcagggtggcgaggagcgcgtcggcggaagcgcccgcgccctga
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