Sphingobium sp. SYK-6: SLG_25650
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Entry
SLG_25650 CDS
T01622
Name
(GenBank) efflux pump periplasmic linker protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy01501
beta-Lactam resistance
ssy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SLG_25650
01503 Cationic antimicrobial peptide (CAMP) resistance
SLG_25650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssy03036
]
SLG_25650
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssy02000
]
SLG_25650
01504 Antimicrobial resistance genes [BR:
ssy01504
]
SLG_25650
Chromosome and associated proteins [BR:
ssy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SLG_25650
Transporters [BR:
ssy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SLG_25650
Antimicrobial resistance genes [BR:
ssy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SLG_25650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
HH_EMRA
BSH_CusB
HH_AprE
HH_MFP_RND
Peptidase_M23
Beta-barrel_RND_2
Motif
Other DBs
NCBI-ProteinID:
BAK67240
LinkDB
All DBs
Position
complement(2777092..2778159)
Genome browser
AA seq
355 aa
AA seq
DB search
MAKWLWLAGAALTLSACGGEQARDPAATAALPAGETLRLVPAEIADLKAIGAEIATRDQA
EALARIPGTLTSLSIRAGDMVRKGQRIGMIVDARLGYETSAYGAQVAAAQAEEARANADL
ARIRDLYDNGVYAKARLDQAVAMARAANAQVAATRAQQGASASVAGQGAVLAPATGRVLR
ADIPAGSVVAPGMSIATVTAGPPILRLMLPETVAPQVQIGAPVLVDASDMPEGGREGRVV
QVYPAVTGGQVRVDATLPGLAADLVGRRVGASIAVGRRSALVVPKRFVTTRYGIDQVQVV
TADKRLSMVPVQIAPTAEAGKVEILSGVSPGDTLFAPQGARPGTASPQPADKVPG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtggctctggctggcaggggcggcactcacgctgtcggcctgtggcggtgaa
caggcgcgcgatccggcggcgaccgccgcgctgcccgccggggagacactgcggctggtg
ccagccgaaattgccgacctgaaagcgatcggcgcggaaatcgcgacccgcgatcaggcg
gaagcgcttgcccgcattcccggcacgctcacgagcctctccattcgtgctggcgacatg
gtgcgcaaagggcagcgcatcggcatgatcgtggatgcacggctcggctacgagacttcg
gcttatggcgcgcaggtcgcggccgcgcaggcggaagaggcgcgcgccaatgccgatctc
gcgcggatacgcgacctctatgacaatggcgtctatgccaaagcccggctcgatcaggca
gtcgccatggcccgcgccgccaatgcgcaggtcgccgcgacccgggcgcagcagggcgcc
agcgccagcgtggccggccagggcgcggtgctggcccccgcaacgggacgggtgctgcgt
gcagacattcccgccggttccgtggtcgcgccgggcatgtcgatcgccacggtgaccgcc
ggtccgccgatcctgcggctgatgctgcccgagactgtcgctccgcaggtgcaaatcggc
gcgccggtgctggtggatgcaagcgacatgccggaaggcgggcgcgaaggccgggtcgtg
caggtctatcccgccgtgacgggcggccaggtgcgtgtcgatgcgacgctgcccggcctt
gcagccgatctcgtcgggcggcgcgtcggggcgtcgatcgccgtggggcggcgcagcgcg
ctggtcgtgccgaaacgcttcgtcaccacgcgctatggcatcgatcaggtgcaggtcgtg
accgccgacaagcggttgagcatggtcccggtccagatcgcgccaactgccgaggccggg
aaggtcgagattctgagcggcgtttcgcctggcgacacgctgtttgcgccgcagggcgcg
cgccccggaaccgcgagtccccagcctgccgacaaggtgccgggctga
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