Symphalangus syndactylus (siamang): 129458220
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Entry
129458220 CDS
T10134
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn00900
Terpenoid backbone biosynthesis
ssyn01100
Metabolic pathways
Module
ssyn_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
129458220 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ssyn01006
]
129458220 (GGPS1)
Enzymes [BR:
ssyn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
129458220 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
129458220 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
129458220 (GGPS1)
Prenyltransferases [BR:
ssyn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
129458220 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
129458220
NCBI-ProteinID:
XP_055089923
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All DBs
Position
12:79789517..79808845
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AA seq
300 aa
AA seq
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MEKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLL
ELHQGQGLDIYWRDNYACPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
IDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALIKHLSKMFKEENE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggagaagactcaagaaacagtccaaagaattcttctagaaccgtataaatacttactt
cagttaccaggtaaacaagtgagaaccaaactttcacaggcatttaatcattggctgaaa
gttccagaggacaagctacagattattattgaagtgacagaaatgttgcataatgccagt
ttactcatcgatgatattgaagacaattcaaaactccgacgtggctttccagtggcccac
agcatctatggaatcccatctgtcatcaattctgccaattatgtgtatttccttggcttg
gagaaagtcttaacccttgatcacccagatgcagtgaagctttttacccgccagcttttg
gaactccatcagggacaaggcctagatatttactggagggataattacgcttgtcccact
gaagaagaatataaagctatggtgctgcagaaaacaggtggactgtttggattagcagta
ggtctcatgcagttgttctctgattacaaagaagatttaaaaccactacttaatacactt
gggctctttttccaaattagggatgattatgctaatctacactccaaagaatatagtgaa
aacaaaagtttttgtgaagatctaacagagggaaagttctcatttcctactattcatgct
atttggtcaaggcctgaaagcacccaagtgcagaatatcttgcgccagagaacagaaaac
atagatataaaaaaatactgtgtacattatcttgaagatgtaggttcttttgaatacact
cgtaatactcttaaagagcttgaagctaaagcctataaacagattgatgcacgtggtggg
aaccctgagctagtagccctaataaaacacttaagtaagatgttcaaagaagaaaatgaa
taa
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