Symphalangus syndactylus (siamang): 129461245
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Entry
129461245 CDS
T10134
Symbol
CLEC4M
Name
(RefSeq) C-type lectin domain family 4 member M isoform X1
KO
K06563
C-type lectin domain family 4 member L/M
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03260
Virion - Human immunodeficiency virus
ssyn03264
Virion - Flavivirus and Alphavirus
ssyn03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ssyn03273
Virion - Lassa virus and SFTS virus
ssyn04145
Phagosome
ssyn04517
IgSF CAM signaling
ssyn04625
C-type lectin receptor signaling pathway
ssyn05152
Tuberculosis
ssyn05162
Measles
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
129461245 (CLEC4M)
03264 Virion - Flavivirus and Alphavirus
129461245 (CLEC4M)
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
129461245 (CLEC4M)
03273 Virion - Lassa virus and SFTS virus
129461245 (CLEC4M)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129461245 (CLEC4M)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129461245 (CLEC4M)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
129461245 (CLEC4M)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
129461245 (CLEC4M)
09171 Infectious disease: bacterial
05152 Tuberculosis
129461245 (CLEC4M)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129461245 (CLEC4M)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ssyn04054
]
129461245 (CLEC4M)
04515 Cell adhesion molecules [BR:
ssyn04515
]
129461245 (CLEC4M)
04090 CD molecules [BR:
ssyn04090
]
129461245 (CLEC4M)
04091 Lectins [BR:
ssyn04091
]
129461245 (CLEC4M)
Membrane trafficking [BR:
ssyn04131
]
Endocytosis
Phagocytosis
C-lectin receptors
129461245 (CLEC4M)
Pattern recognition receptors [BR:
ssyn04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
129461245 (CLEC4M)
Cell adhesion molecules [BR:
ssyn04515
]
Lectins
Selectins and C-type lectins
129461245 (CLEC4M)
CD molecules [BR:
ssyn04090
]
Proteins
129461245 (CLEC4M)
Lectins [BR:
ssyn04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
129461245 (CLEC4M)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_C
DUF2730
DUF2170
Occludin_ELL
Baculo_PEP_C
VMAP-M0
DIMCO_N
CT398_CC
Med10
Vps5
UL45
Motif
Other DBs
NCBI-GeneID:
129461245
NCBI-ProteinID:
XP_055096235
LinkDB
All DBs
Position
13:33790855..33796553
Genome browser
AA seq
399 aa
AA seq
DB search
MSDCKEPRVQPLGLLEEDPTTSGIRLFPRDFQFQQTHGHKSSTGCLGHGPLVLQLLSFAL
LAGVLVAILVQVYKVPSSLSQEQSKQDVIYQNLTQLKAAVGELSEKSKLQEIYQELTRLK
AAVGELPEKSKQQEIYQELTQLKASVGELPEKSQLQEIYQELTRLKAAVGELPEESRLQE
IYQELTRLKAAVGELPEKSRLQEIYQELTQLKAAVGELPEKSKLQEIYQELTRLKAAVGE
LPDQSKQQQIYQELTDLKTAFERLCCRCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVG
AQLVVIKSAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSSSFQRYWNSGEP
NNSGDEDCAEFSGSGWNDNRCNVDNYWICKKPIACFRDE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactgcaaggaaccaagggtgcagccgctgggcctcctggaagaagatccgaca
accagtggcatcagactttttccaagagactttcaattccagcagacacatggccacaag
agctctacagggtgtcttggccatggccccctggtgctgcaactcctctccttcgcgctt
ttggctggggtcctggtggccatccttgtccaagtgtacaaggtccccagctccctaagt
caggaacaatccaagcaagacgtaatctaccagaatctgacccagcttaaagctgcagtg
ggtgagctctcagagaaatccaagctgcaggagatctaccaggagctgacccggctgaag
gctgcagtgggtgagcttccagagaaatctaagcagcaggagatctaccaggagctgacc
cagctgaaggcttcagtgggtgagcttccagagaaatctcagctgcaggagatctaccag
gagctgacccggctgaaggctgcagtgggtgagcttccagaggaatctaggctgcaggag
atctaccaggagctgacccggctgaaggctgcagtgggtgagcttccagagaaatctagg
ctgcaggagatctaccaggagctgacccagctgaaggctgcagtgggtgagttgccagag
aaatccaagctacaggagatctaccaggagctgacccggctgaaggctgcagtgggtgag
ttgccagaccagtccaagcagcagcaaatctatcaagaactgaccgatttgaagactgca
tttgaacgcctgtgctgccgctgtcccaaggactggacattcttccaaggaaactgttac
ttcatgtctaactcccagcggaactggcacgactccgtcaccgcctgccaggaagtgggg
gcccagctcgtcgtaatcaaaagtgctgaggagcagaacttcctgcagctgcagacttcc
aggagtaaccgcttctcctggatgggactttcagacctaaatcaggaaggcacgtggcaa
tgggtggacggctcacctctgtcatccagcttccagcggtactggaacagtggagaaccc
aacaacagcggggatgaagactgtgcggaatttagtggcagtggctggaacgacaatcga
tgtaacgtcgacaattactggatctgcaaaaagcccatagcctgcttcagagacgaatag
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integrated database retrieval system
