Symphalangus syndactylus (siamang): 129461245
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Entry
129461245 CDS
T10134
Symbol
CLEC4M
Name
(RefSeq) C-type lectin domain family 4 member M isoform X1
KO
K06563
C-type lectin domain family 4 member L/M
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03260
Virion - Human immunodeficiency virus
ssyn03264
Virion - Flavivirus and Alphavirus
ssyn03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ssyn03273
Virion - Lassa virus and SFTS virus
ssyn04145
Phagosome
ssyn04625
C-type lectin receptor signaling pathway
ssyn05152
Tuberculosis
ssyn05162
Measles
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
129461245 (CLEC4M)
03264 Virion - Flavivirus and Alphavirus
129461245 (CLEC4M)
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
129461245 (CLEC4M)
03273 Virion - Lassa virus and SFTS virus
129461245 (CLEC4M)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129461245 (CLEC4M)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
129461245 (CLEC4M)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
129461245 (CLEC4M)
09171 Infectious disease: bacterial
05152 Tuberculosis
129461245 (CLEC4M)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129461245 (CLEC4M)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ssyn04054
]
129461245 (CLEC4M)
04515 Cell adhesion molecules [BR:
ssyn04515
]
129461245 (CLEC4M)
04090 CD molecules [BR:
ssyn04090
]
129461245 (CLEC4M)
04091 Lectins [BR:
ssyn04091
]
129461245 (CLEC4M)
Membrane trafficking [BR:
ssyn04131
]
Endocytosis
Phagocytosis
C-lectin receptors
129461245 (CLEC4M)
Pattern recognition receptors [BR:
ssyn04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
129461245 (CLEC4M)
Cell adhesion molecules [BR:
ssyn04515
]
Lectins
Selectins and C-type lectins
129461245 (CLEC4M)
CD molecules [BR:
ssyn04090
]
Proteins
129461245 (CLEC4M)
Lectins [BR:
ssyn04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
129461245 (CLEC4M)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
DUF2170
DUF2730
Occludin_ELL
Baculo_PEP_C
Med10
DUF2357
Vps5
Com_YlbF
UL45
Motif
Other DBs
NCBI-GeneID:
129461245
NCBI-ProteinID:
XP_055096235
LinkDB
All DBs
Position
13:33790855..33796553
Genome browser
AA seq
399 aa
AA seq
DB search
MSDCKEPRVQPLGLLEEDPTTSGIRLFPRDFQFQQTHGHKSSTGCLGHGPLVLQLLSFAL
LAGVLVAILVQVYKVPSSLSQEQSKQDVIYQNLTQLKAAVGELSEKSKLQEIYQELTRLK
AAVGELPEKSKQQEIYQELTQLKASVGELPEKSQLQEIYQELTRLKAAVGELPEESRLQE
IYQELTRLKAAVGELPEKSRLQEIYQELTQLKAAVGELPEKSKLQEIYQELTRLKAAVGE
LPDQSKQQQIYQELTDLKTAFERLCCRCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVG
AQLVVIKSAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSSSFQRYWNSGEP
NNSGDEDCAEFSGSGWNDNRCNVDNYWICKKPIACFRDE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactgcaaggaaccaagggtgcagccgctgggcctcctggaagaagatccgaca
accagtggcatcagactttttccaagagactttcaattccagcagacacatggccacaag
agctctacagggtgtcttggccatggccccctggtgctgcaactcctctccttcgcgctt
ttggctggggtcctggtggccatccttgtccaagtgtacaaggtccccagctccctaagt
caggaacaatccaagcaagacgtaatctaccagaatctgacccagcttaaagctgcagtg
ggtgagctctcagagaaatccaagctgcaggagatctaccaggagctgacccggctgaag
gctgcagtgggtgagcttccagagaaatctaagcagcaggagatctaccaggagctgacc
cagctgaaggcttcagtgggtgagcttccagagaaatctcagctgcaggagatctaccag
gagctgacccggctgaaggctgcagtgggtgagcttccagaggaatctaggctgcaggag
atctaccaggagctgacccggctgaaggctgcagtgggtgagcttccagagaaatctagg
ctgcaggagatctaccaggagctgacccagctgaaggctgcagtgggtgagttgccagag
aaatccaagctacaggagatctaccaggagctgacccggctgaaggctgcagtgggtgag
ttgccagaccagtccaagcagcagcaaatctatcaagaactgaccgatttgaagactgca
tttgaacgcctgtgctgccgctgtcccaaggactggacattcttccaaggaaactgttac
ttcatgtctaactcccagcggaactggcacgactccgtcaccgcctgccaggaagtgggg
gcccagctcgtcgtaatcaaaagtgctgaggagcagaacttcctgcagctgcagacttcc
aggagtaaccgcttctcctggatgggactttcagacctaaatcaggaaggcacgtggcaa
tgggtggacggctcacctctgtcatccagcttccagcggtactggaacagtggagaaccc
aacaacagcggggatgaagactgtgcggaatttagtggcagtggctggaacgacaatcga
tgtaacgtcgacaattactggatctgcaaaaagcccatagcctgcttcagagacgaatag
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integrated database retrieval system