Symphalangus syndactylus (siamang): 129463595
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Entry
129463595 CDS
T10134
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn03450
Non-homologous end-joining
Brite
Enzymes [BR:
ssyn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
129463595 (LIG4)
DNA repair and recombination proteins [BR:
ssyn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
129463595 (LIG4)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129463595
NCBI-ProteinID:
XP_055100248
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Position
15:12011469..12022558
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AA seq
923 aa
AA seq
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MATPQESIKISFYRWDSLVHRGSGACLRPDLCSTLERIQRSKGRAEKIRHFREFLDSWRK
FHDALHKNQKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKFYIELLNLPRDGKDALK
LLNYRTPTGTHGDAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIASNNSAKRKDLIK
KSLLQLISQSSALEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQL
HDPSVGLSDISITLFSAFKPMLAAIADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVY
KYFSRNGYNYTDQFGASPTEGSLTPFIHNAFKTDIQICILDGEMMAYNPNTQTFMQKGTK
FDIKRMVEDSDLQTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQA
HTKNEVIDALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVSGLIDELDILIVG
GYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKP
FHKKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDK
EWHECMTLDDLEQLRGKASGKLASKHLYVGGDDEPQEKKRKAAPKMKKVIGIIEHLKAPN
LTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSKNIR
VKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVD
TDLNELKEVFSGIKNSNEQTPEEMTSLIADLEYRYSWDCCPLSMFRRHTVYLDLYAVIND
LSTKNEGTRLAVKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKI
LKESWVTDSIDKCELQEENQYLI
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccgcaggaaagcatcaagatctcattttaccgctgggattctctcgttcac
agaggtagcggagcttgcctgaggccagatttgtgttcaactttagaacgaatacagaga
agtaaaggacgtgcagaaaaaatcagacacttcagggaatttttagattcttggagaaaa
tttcatgatgctcttcataagaaccaaaaagatgtcacagactctttttatccagcaatg
agactaattcttcctcagctagaaagagagagaatggcctatggaattaaagaaactatg
cttgctaagttttatattgagttgcttaatttacctagagacggaaaagatgccctcaaa
cttttaaactacagaacacccactggaactcatggagatgctggagactttgcaatgatt
gcatattttgtgttgaagccaagatgtttacagaaaggaagtttaaccatacagcaagta
aacgaccttttagactcaattgccagcaataattctgctaaaagaaaagacctaataaaa
aagagccttcttcaacttataagtcagagttcagcacttgagcaaaagtggcttatacgg
atgatcataaaggatttaaagcttggtgttagtcagcaaactatcttttctgtttttcat
aatgatgctgctgagttgcataatgtcactactgatctggaaaaagtctgtaggcaactg
catgacccttctgtaggacttagtgatatttctatcactttattttctgcctttaaacca
atgctagctgctattgcagatattgagcacattgagaaggatatgaaacatcagagtttc
tacatagaaaccaagctagatggcgaacgtatgcaaatgcacaaagatggagatgtatat
aaatacttctctcgaaatggatataactatactgatcagtttggtgcttctcctacagaa
ggttctcttaccccattcattcataatgcattcaaaacagatatacaaatctgtattctt
gatggtgagatgatggcctataatcctaatacacaaactttcatgcaaaagggaactaag
tttgatattaaaagaatggtagaggattctgatctacaaacttgttattgtgtttttgat
gtattgatggttaataataaaaagctagggcatgagactctgagaaagaggtatgagatt
ctcagtagtatttttacaccaattccaggtagaatagaaatagtgcagaaaacacaagct
catactaagaatgaggtaattgatgcattgaatgaagcaatagataaaagagaagaggga
attatgataaaacaacctctatccatctacaagccagacaaaagaggtgaagggtggtta
aaaattaaaccagagtatgtcagtggactaatagatgaattggacattttaattgttgga
ggatattggggtaaaggatcacggggtggaatgatgtctcattttttgtgtgcagtagca
gagaagccccctcctggtgagaagccatctgtgtttcatactctctctcgtgttggctct
ggctgcaccatgaaagaactgtatgatctgggtttgaaattggccaagtattggaagcct
tttcataaaaaagctccaccaagtagcattttatgtggaacagagaagccagaagtgtac
attgaaccttgtaattctgtcattgttcagattaaggcagcagagatcgtacccagtgat
atgtataaaactggctgcaccttgcgttttccacgaattgaaaagataagagatgacaaa
gagtggcatgagtgcatgaccctggacgacctagaacaacttagggggaaagcatctggt
aagctcgcatctaaacacctttatgtaggtggtgatgatgaaccacaagaaaaaaagcgg
aaagctgccccaaagatgaagaaagttattggaattattgagcacttaaaagcacctaac
cttactaacgttaacaaaatttcgaatatatttgaagatgtagagttttgtgttatgagt
ggaacagatagccagccaaagcctgacctggagaacagaattgcagaatttggtggttat
atagtacaaaatccaggcccagacacgtactgtgtaattgcagggtctaagaacatcaga
gtgaaaaacataattttgtcaaataaacatgatgttgtcaagcctgcatggcttttagaa
tgttttaagaccaaaagctttgtgccatggcagcctcgctttatgattcatatgtgccca
tcaaccaaagaacattttgcccgtgaatatgattgctatggtgatagttattttgttgat
acagacttgaacgaactgaaggaagtattctcaggaattaaaaattctaatgagcagact
cctgaagaaatgacttctctgattgctgatttagaatatcggtattcctgggattgctgt
cctctcagtatgtttcgacggcacaccgtttatttggacttgtatgctgttattaatgac
ctgagtaccaaaaatgaggggacaaggttagctgttaaagccttggagcttcggtttcat
ggagcaaaagtagtttcttgtttagctgagggagtgtctcatgtaatcattggggaagat
catagtcgtgttgcagattttaaagcttttagaagaacgtttaagagaaagtttaaaatc
ctaaaagaaagttgggtcactgattcaatagacaagtgtgaattacaagaagaaaaccag
tatttgatttaa
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